Pairwise Alignments

Query, 601 a.a., penicillin-binding protein activator from Vibrio cholerae E7946 ATCC 55056

Subject, 603 a.a., LppC putative lipoprotein from Pseudomonas fluorescens FW300-N1B4

 Score =  218 bits (556), Expect = 4e-61
 Identities = 169/600 (28%), Positives = 294/600 (49%), Gaps = 29/600 (4%)

Query: 11  RLLTPIALSIVLSACSTQPSSPDVVDITAQPLLTAQTYLMRADASQGNQQNDWL-IMALK 69
           RL T + L+ +L+AC++ PSS  + ++   P  + +  L +A  S+  ++   L + A  
Sbjct: 6   RLFTALCLAALLAACASSPSS-SLGELPRTPDASIEQLLEQATRSKDPEKAALLRLSAAD 64

Query: 70  AAIEENNPDQAQLLIMRLAKQPLTPTQQAQWQLLRAQLLANTEQYQEALEQLS---FQAN 126
            A  + N  Q+  ++ ++  + L P QQ     L A+L     Q + AL  LS    Q  
Sbjct: 65  LAYRQGNAGQSAQILQQVPVEQLKPGQQVFANTLAAELAMTRNQPKAALTALSHPSLQRL 124

Query: 127 WSLPQVQWQQYHQLRADIFTALDRSFDSTRELV----ALYGLSSNKDKEALADQIWANLN 182
             LP  Q  +   + A    A  ++  + RE +     L G +++K+ EA    IW  + 
Sbjct: 125 NELPVEQQVRTGTVHARALEADGQTLAAARERIFIAPMLEGEAASKNHEA----IWTLIA 180

Query: 183 HYSASKIIKLSTEPDEAQLDGWLQLAIYMKTLGSDLPQLKNTLEKWLAENPQHPAAIYTP 242
                ++ + +T+ D   L GW++LA+ +KT G+ L Q +  ++ W  +NP+HPAA+  P
Sbjct: 181 SLPTDQL-QPTTDDD---LGGWIRLALVVKTAGT-LEQQQAAIDNWREQNPKHPAAVQLP 235

Query: 243 KAITDILALEIVKPTNTALLLPLTGKFAKQAQFIRDGFVFAMMNDADRQTNATLTIIDTN 302
             +T +  L     +  ALLLP  G      + +R+GF+ A    A +       I   +
Sbjct: 236 LPLTKLKELASQPLSKIALLLPQDGPLGPVGKALREGFMAAHYQ-AQQAGQKPPAIEFYD 294

Query: 303 AETLESVDAILTSKQID---FVVGPLIKGNIEKLQQFQQSRGQM-IPTLALNIPDQIDTT 358
           +  L S+D      Q D    VVGPL K  +++L     +R Q+ I TLALN  +     
Sbjct: 295 SSRLTSLDDFYRKAQADGVQLVVGPLEKPLVKQLS----ARAQLPITTLALNYSEGAQGP 350

Query: 359 AGACYLALSPEQEVAQAAKHLFTQGYRYPLILAPQNAYGERVVEAFNEEWRRYSKNKVAV 418
           A      L+ E E  + ++     G     I+ P+  +G+RV+ AF+++W+    + VA 
Sbjct: 351 AQLFQFGLAAEDEAREVSRRARADGLHRAAIMVPKGEWGDRVLRAFSQDWQANGGSIVAT 410

Query: 419 NLFGDKRQLQRNINSIFGLQDSQQNIAQMESLLGMGLESQPRSRRDIDAVYIVANSSELT 478
                  QL + I  +F L+ S+     ++S +G  + +QP  R+DI+ +++ A   +  
Sbjct: 411 ERVDQPVQLAQQIADMFQLRQSEGRAKSLQSTVGSQVAAQPSRRQDIEFIFLAATPQQAQ 470

Query: 479 LIKPFIEVAINPDTRPPKLFSNSNSNTGGR-QYEDLSGVTYSDIPLLIQPAPSIKEQLTQ 537
            IKP +      D  P    S+  S +G + QY D++G+ + + P L+     +++Q+T 
Sbjct: 471 QIKPTLNFQYAGDV-PVYATSHVFSASGDQNQYNDMNGIRFCETPWLLDANDPLRKQVTA 529

Query: 538 IWPESSNAERRLQALGMDAYRLMVELPQMKIVEGYTIDGQTGVLSIDEQCVVQREISWAE 597
            WP++  +  RL A+G+DAYRL   L Q+K +    I GQ+G L + +   V+R++ WAE
Sbjct: 530 QWPQAGGSLGRLYAMGVDAYRLAPRLGQLKALPDSRIQGQSGSLGMTQNQRVERQLPWAE 589