Pairwise Alignments

Query, 601 a.a., penicillin-binding protein activator from Vibrio cholerae E7946 ATCC 55056

Subject, 595 a.a., putative lipoprotein (RefSeq) from Shewanella amazonensis SB2B

 Score =  284 bits (727), Expect = 6e-81
 Identities = 169/575 (29%), Positives = 294/575 (51%), Gaps = 10/575 (1%)

Query: 27  TQPSSPDVVDITAQPLLTAQTYLMRADASQGNQQNDWLIMALKAAIEENNPDQAQLLIMR 86
           +QP  P  V +    L ++Q   +   A     ++ + ++A  A + E+NP  A  L+  
Sbjct: 18  SQPQGP--VSLVKAELSSSQYLALADSAKDAASRSRYQLLAAHALLNESNPQGAAQLLGA 75

Query: 87  LAKQPLTPTQ-QAQWQLLRAQLLANTEQYQEALEQLSFQANWSLPQVQWQQYHQLRADIF 145
           +       T+ QA+++ L A+ L  +     AL+ L + ++W LP  QW  YHQLRA +F
Sbjct: 76  IRGNLAQDTEIQAEFKYLTARTLEQSGDTAAALKTLVYPSHWKLPDWQWVSYHQLRAQLF 135

Query: 146 TALDRSFDSTRELVALYGLSSNKDKEALADQIWANLNHYSASKIIKLSTEPDEAQLDGWL 205
               +  D  REL  L    +  +   + D++W  L       I     E       GWL
Sbjct: 136 RLKKQPMDEVRELAELGKYLNATEAAEVNDRLWGILAPMHEETIETFMQEATSPMYKGWL 195

Query: 206 QLAIYMKTLGSDLPQLKNTLEKWLAENPQHPAAIYTPKAITDILALEIVKPTNTALLLPL 265
           QLA   K    D   L   L  W  ENP HPAA   P  +   L  +  +  + A+LLPL
Sbjct: 196 QLAFIAKHYAVDPQTLVRFLGDWQRENPFHPAANRLPSDLDRALNAKPYQARHIAVLLPL 255

Query: 266 TGKFAKQAQFIRDGFVFAMMNDADRQTNATLTIIDTNAETLESVDAILTSKQIDFVVGPL 325
           +G  A     I+ G +   +   D  +N  ++  D+ A  + +    L ++  +F++GPL
Sbjct: 256 SGSAASAGYAIKQGILAGYLAADD--SNTKVSFYDSGANAVAAYQQAL-AEGAEFIIGPL 312

Query: 326 IKGNIEKLQQFQQSRGQMIPTLALNIPDQIDTTAGACYLALSPEQEVAQAAKHLFTQGYR 385
           ++ +IE ++   +++G  +P L LN            Y +LSP +E + AA+ L+  G  
Sbjct: 313 LQSSIEAIEALPKAQGPSVPQLYLNQIGTYQANVDKFYFSLSPSEEASDAAERLYRDGVE 372

Query: 386 YPLILAPQNAYGERVVEAFNEEWRRYSKNKVAVNLFGDKRQLQRNINSIFGLQDSQQNIA 445
            PL+LA  +A G R+ EAFN+ W + + +   V+ F    +++  +    G+ DS+  IA
Sbjct: 373 KPLLLASADATGRRMAEAFNQTWHKQTGDVAEVHYFEQGNEMKLTVQRALGVMDSEARIA 432

Query: 446 QMESLLGMGLESQPRSRRDIDAVYIVANSSELTLIKPFIEVAINPDTRPPKLFSNSNS-- 503
           +M+ +LG  LE++ RSR D+DA+Y++A+  E+ L+KPFI+V+ +    P  ++++S +  
Sbjct: 433 RMKEILGRRLEAEFRSREDVDAIYMIASPQEIQLLKPFIDVSFSVFADPVPMYTSSRARP 492

Query: 504 NTGGRQY-EDLSGVTYSDIPLLIQPAPSIKEQLTQIWPESSNAERRLQALGMDAYRLMVE 562
               RQ  ++ + V  SDIP L+  +   ++ + ++WP  +N ++RL  +G DA  L+ +
Sbjct: 493 QDNARQVPQEFNNVMVSDIPWLMHLSGESRD-INELWPTWNNGQKRLFIMGWDALDLVGK 551

Query: 563 LPQMKIVEGYTIDGQTGVLSIDEQCVVQREISWAE 597
           L QM+   G+   G+ GVLS+    +++R++SW +
Sbjct: 552 LAQMRAFPGFQFQGRGGVLSVTHDGLIKRQLSWGK 586