Pairwise Alignments

Query, 601 a.a., penicillin-binding protein activator from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., LppC family lipoprotein (RefSeq) from Shewanella loihica PV-4

 Score =  287 bits (734), Expect = 1e-81
 Identities = 183/630 (29%), Positives = 305/630 (48%), Gaps = 42/630 (6%)

Query: 5   QRRSVPRLLTPIALSIVLSACSTQPSSPDVVDITAQPLLTAQT-----YLMRA-DASQGN 58
           +R +  + ++   L+ VL  C+T P+   V + + Q  L   T     YL  A  AS   
Sbjct: 3   KRLNTTKFISAAVLATVLFGCATAPTP--VKETSTQVSLVNATQSPAEYLADAKQASDAE 60

Query: 59  QQNDWLIMALKAAIEENNPDQAQLLIMRLAKQPLT-PTQQAQWQLLRAQLLANTEQYQEA 117
           Q+N  +++A  A I + +   A   +  +    +  P   A+ + L A++L  T  Y +A
Sbjct: 61  QKNRLMLLAAHAFINQGDTGNASKTLAAVKPSLVNKPEILAEHRYLSARVLEQTANYDQA 120

Query: 118 LEQLSFQANWSLPQVQWQQYHQLRADIFTALDRSFDSTRELVALYGLSSNKDKEALADQI 177
           L QL++ + W L   Q   YHQL+A +F       +  +EL  L     + +   + D+I
Sbjct: 121 LAQLNYPSKWRLANWQMVSYHQLKARLFQLSKSPIEQAKELTLLATYLPSTEASEVNDEI 180

Query: 178 WANLNHYSASKIIKLSTEPDEAQLDGWLQLAIYMKTLGSDLPQLKNTLEKWLAENPQHPA 237
           W  L       ++  S +       GWLQLA   K    D  QL   L  W  +NP HP 
Sbjct: 181 WGILQPLHEQTLLAFSQDSSNPIFAGWLQLAYIAKHYAIDPQQLVQQLGNWQQDNPGHPG 240

Query: 238 AIYTPKAITDILALEIVKPTNTALLLPLTGKFAKQAQFIRDGFVFAMMNDADRQTNATLT 297
           A   P  +   L  +  KP   A+LLPLTG  A  A  ++ G + + + + D   + ++ 
Sbjct: 241 AKKLPTDLERALNTKPYKPKKIAVLLPLTGPRAAIADTVKQGIISSYLTNPD--DSVSVN 298

Query: 298 IIDTNAETLESVDAILTSKQIDFVVGPLIKGNIEKLQQFQQSRGQM-------------- 343
             DT A+  E       +   DF++GPL++  +E L Q +Q   Q               
Sbjct: 299 FFDT-AQGAELAQQQAIAAGADFIIGPLLQSEVESLMQAEQKASQQANGQQQPGAQAQAQ 357

Query: 344 ------------IPTLALNIPDQIDTTAGACYLALSPEQEVAQAAKHLFTQGYRYPLILA 391
                       +P L LN  D    +    + ALSP  E   AA+ L+  G   PL+LA
Sbjct: 358 AQAQAQAQVQPKVPQLFLNHVDSFTPSNDQFFFALSPTDEAVDAAQKLYNDGIEKPLLLA 417

Query: 392 PQNAYGERVVEAFNEEWRRYSKNKVAVNLFGDKRQLQRNINSIFGLQDSQQNIAQMESLL 451
             +A G R+ EAFN +W+  +     ++ +    +++  +    G+ DS++ IA++++LL
Sbjct: 418 SDDAVGRRMAEAFNGKWQELTHEAAEIHYYKRGDEMKVTVQKSLGVIDSKERIARIKTLL 477

Query: 452 GMGLESQPRSRRDIDAVYIVANSSELTLIKPFIEVAINPDTRPPKLFSNSNSNTGGRQ-- 509
           G  +E+  RSRRDIDA+Y++A+S +L L+KPFI+V  +    P  L++ S S    +   
Sbjct: 478 GNKIEADFRSRRDIDAIYMIASSQDLPLLKPFIDVNFSVFAEPVPLYTTSRSRIESQSRT 537

Query: 510 -YEDLSGVTYSDIPLLIQPAPSIKEQLTQIWPESSNAERRLQALGMDAYRLMVELPQMKI 568
             ++L+ +T SDIP LI+      E + ++WP   N+++RL  +G DA +L+ +L QM+ 
Sbjct: 538 AAQELNNLTISDIPWLIETNAETAE-VARLWPTWGNSQKRLYVMGFDALQLVSKLAQMRA 596

Query: 569 VEGYTIDGQTGVLSIDEQCVVQREISWAEH 598
           + GY   G++G+LS+     + R++SW  +
Sbjct: 597 LPGYQYSGRSGLLSVSPDGTINRQLSWGRY 626