Pairwise Alignments

Query, 601 a.a., penicillin-binding protein activator from Vibrio cholerae E7946 ATCC 55056

Subject, 693 a.a., penicillin-binding protein activator from Klebsiella michiganensis M5al

 Score =  163 bits (412), Expect = 3e-44
 Identities = 104/312 (33%), Positives = 167/312 (53%), Gaps = 13/312 (4%)

Query: 293 NATLTIIDTNAETLESVDAILTSKQIDFVVGPLIKGNIEKLQQFQQSRGQMIPTLALNIP 352
           +A L I DT  + +  + A +       VVGPL+K N+E++ +   S    +  LALN P
Sbjct: 380 SAELKIYDTTTQPMSQLLAQVQQDGATIVVGPLLKDNVEQVIKSNTS----LNVLALNQP 435

Query: 353 DQIDTTAGACYLALSPEQEVAQAAKHLFTQGYRYPLILAPQNAYGERVVEAFNEEWRRYS 412
           ++I++ A  CY ALSPE E   AA H+  QG + PL+L P+ A G+RVV AF  EW +  
Sbjct: 436 EKIESRANICYFALSPEDEARDAAHHIHDQGKQTPLLLVPRGALGDRVVTAFANEWLKLG 495

Query: 413 KNKVAVNLFGDKRQLQRNINSIFGLQDSQQNI--AQMESLLGMGLESQPRSRRDIDAVYI 470
              V     G   +L+ ++NS   L  +  +   +  +S LG   +    S   +DA YI
Sbjct: 496 GGTVLQQRLGSTAELRGSVNSGISLSGTPVSTLPSGQDSALGSPSDVPVSSTGGVDAAYI 555

Query: 471 VANSSELTLIKPFIEVAINPDTRPPKLFSNSNS--NTGGRQYE-DLSGVTYSDIPLLIQP 527
           +A   ++  IKP I +  N       L+++S S   T G  +  ++ G+ YS+IP+L   
Sbjct: 556 LATPEQIAYIKPMIALR-NGSQSGVTLYASSRSAQGTSGPDFRLEMEGLQYSEIPMLAGS 614

Query: 528 APSIKEQ-LTQIWPESSNAERRLQALGMDAYRLMVELPQMKIVEGYTIDGQTGVLSIDEQ 586
            P++++Q L  +  + S A  RL A+G DA+ L     QM+ V G+ ++G TG L+  + 
Sbjct: 615 NPALQQQALAAVRNDYSLA--RLYAMGADAWSLANHFSQMRQVPGFELNGNTGDLTATQD 672

Query: 587 CVVQREISWAEH 598
           CV+ R++SW ++
Sbjct: 673 CVINRKLSWLKY 684



 Score = 81.6 bits (200), Expect = 1e-19
 Identities = 72/278 (25%), Positives = 112/278 (40%), Gaps = 8/278 (2%)

Query: 7   RSVPRLLTPIALS-IVLSACSTQPSSPDVVDITAQPLLTAQTYLMRADASQGNQQNDWLI 65
           RS P    P+ L+ ++ + C T         +       +  YL +   S  + + +W +
Sbjct: 8   RSKPVRCLPVLLAALIFAGCGTHTPDQSTAYLQGTAQADSSYYLQQMQQSANDSKTNWQL 67

Query: 66  MALKAAIEENNPDQAQLLIMRLAKQPLTPTQQAQWQLLRAQLLANTEQYQEALEQLSFQA 125
           +A++A ++E    QA  L  +L    L   Q  +  LL  ++      +Q A   LS   
Sbjct: 68  LAIRALLKEGKKPQAVDLFNQLPSN-LNAAQSRERSLLAVEVKLAQNDFQGAQTLLSKLD 126

Query: 126 NWSLPQVQWQQYHQLRADIFTALDRSFDSTRELVA---LYGLSSNKDKEALADQIWANLN 182
             SL Q Q  +Y Q + D       S +  R L+A   L  L + K K    D  W  L 
Sbjct: 127 PASLEQNQQPRYWQAQIDASQG-QPSLNLLRALIAQQPLLSLPAQKQKNI--DATWKALT 183

Query: 183 HYSASKIIKLSTEPDEAQLDGWLQLAIYMKTLGSDLPQLKNTLEKWLAENPQHPAAIYTP 242
             +  +   L    DE  L GWL L        +D   LK  ++ W    PQ+P A   P
Sbjct: 184 AMTKDQANALVINADENVLQGWLDLQRMWFDNRNDPTMLKAGVKDWQTRYPQNPGAKMLP 243

Query: 243 KAITDILALEIVKPTNTALLLPLTGKFAKQAQFIRDGF 280
             + ++   +       ALLLPL G+ A   + I+ GF
Sbjct: 244 TQLVNMQNYQAASTNKIALLLPLNGQAAIFGRTIQQGF 281