Pairwise Alignments

Query, 601 a.a., penicillin-binding protein activator from Vibrio cholerae E7946 ATCC 55056

Subject, 627 a.a., LppC family lipoprotein (RefSeq) from Shewanella sp. ANA-3

 Score =  290 bits (742), Expect = 1e-82
 Identities = 195/610 (31%), Positives = 304/610 (49%), Gaps = 35/610 (5%)

Query: 18  LSIVLSACSTQ-PSS----PDVVDITAQPLLTAQTYLMRADASQGNQQNDW-LIMALKAA 71
           LS VL+ C +Q PSS    P V    A   L    YL +A  S+  QQ D  L++A  A 
Sbjct: 16  LSAVLAGCGSQAPSSTGTAPTVATSLASAPLAPNVYLAQAANSKDPQQRDTNLLLAAHAY 75

Query: 72  IEENNPDQAQLLIMRLAKQ-PLTPTQQAQWQLLRAQLLANTEQYQEALEQLSFQANWSLP 130
           I  N+   AQ L+  +      TPT  A+ + L A++L +T  Y EAL+ LS+ + W LP
Sbjct: 76  INANDYAAAQKLLKSMQPSLTQTPTLVAEHKYLTARVLEHTSTYVEALKTLSYPSTWVLP 135

Query: 131 QVQWQQYHQLRADIFTALDRSFDSTRELVALYGLSSNKDKEALADQIWANLNHYSASKII 190
             Q   YHQ RA +F    +  +  REL +L       +   + +QIW  L       + 
Sbjct: 136 GWQMAAYHQFRAHLFQLNKQPIEQVRELSSLTTYLPPAEASEVNNQIWQVLQPMHEQTLQ 195

Query: 191 KLSTEPDEAQLDGWLQLAIYMKTLGSDLPQLKNTLEKWLAENPQHPAAIYTPKAITDILA 250
               + +     GWLQLA   K    D  QL   L  W  +NP HPAA   P  +   L 
Sbjct: 196 TFIRDANNPVFAGWLQLAYIAKHYAVDPNQLVRYLGDWQKQNPYHPAAAKLPTDLDRALN 255

Query: 251 LEIVKPTNTALLLPLTGKFAKQAQFIRDGFVFAMMNDADRQTNATL--TIIDTNAETLES 308
            +   P N A+LLPLTG+ A  A  IR G + + +   + Q       T  D  A   ++
Sbjct: 256 AKPFMPKNIAVLLPLTGQRASAANAIRQGILASYLAKPNEQVAVNFYDTANDAVAAYQQA 315

Query: 309 VDAILTSKQIDFVVGPLIKGNIEKLQQFQQSRGQM-----------------IPTLALNI 351
           V+A       +F++GPL+   I++L     +                     IP L LN 
Sbjct: 316 VNA-----GAEFIIGPLLPNEIDQLLALNNTAPATSTPTGTAPAAPTAPIAPIPQLFLNQ 370

Query: 352 PDQIDTTAGACYLALSPEQEVAQAAKHLFTQGYRYPLILAPQNAYGERVVEAFNEEWRRY 411
            D+  +     Y ALSP QE A AA  ++  G   PL+LA  +A G+R+ E+F + W++ 
Sbjct: 371 TDKFVSDINKFYFALSPAQEAADAATRMYQDGVTMPLLLASNDAIGKRMAESFIQAWKKK 430

Query: 412 SKNKVAVNLFGDKRQLQRNINSIFGLQDSQQNIAQMESLLGMGLESQPRSRRDIDAVYIV 471
           S   + V  +    +++  +    G++DSQ  IA+++ LLG  +++  RSR+DIDA+Y++
Sbjct: 431 SDTPIEVYYYDGGDKMKTTVQDALGVRDSQARIARIKELLGNSVQADFRSRQDIDAIYMI 490

Query: 472 ANSSELTLIKPFIEVAINPDTRPPKLFSNSNS---NTGGRQYEDLSGVTYSDIPLLIQPA 528
           +   +LTL+K FI+V  +  T+P  L+++S S   N   +  +DL+ +T SD P L+Q +
Sbjct: 491 STPQDLTLLKAFIDVNFSVFTQPVPLYTSSRSRIDNESSQTAQDLNNLTMSDAPWLMQNS 550

Query: 529 PSIKEQLTQIWPESSNAERRLQALGMDAYRLMVELPQMKIVEGYTIDGQTGVLSIDEQCV 588
                 +  +W   +N ++RL  +G DA  L+ +L QM+   GY  +G++GVLS++   V
Sbjct: 551 EE-NLMVNTLWSGWNNGQKRLFVMGYDAMDLISKLAQMRSFTGYQFNGRSGVLSVNPDGV 609

Query: 589 VQREISWAEH 598
           + R++SW  +
Sbjct: 610 INRQLSWGRY 619