Pairwise Alignments

Query, 189 a.a., hemolysin from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 55.8 bits (133), Expect = 7e-13
 Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 22/189 (11%)

Query: 16  LTGCAGLFIAGAATTAN-IVTD----PRSTQEIWQDNNVELEV-AGLANKEPYRKDAR-- 67
           L G   L ++G     N IV D    P++    + D   +  + A + +K  + KD    
Sbjct: 84  LAGEIALGVSGIKDVDNKIVVDANYIPKANSNSFGDKFDDTNITAAIRSKLQWNKDVDDV 143

Query: 68  -ISAVAYRGTVVLLGQSRNEAILEQFIAQARQLKGVKELHNQVQIKAPL----------S 116
               +   G V L G + N+         A   +GVK + N +++++            +
Sbjct: 144 VTEVITKSGRVTLNGIAENQNAKNVIHRLALNTRGVKSVTNNLKVESSAINKEEKEKRKN 203

Query: 117 VGEISN--DSWITTKVKSALLTKSELNGIKIKVVTEDRVVYLFGYV-SPEHAEMAIGVAR 173
             EI N  DSWIT K+KS+ +  + +NG  I V T + VV L G V S     +A+  A+
Sbjct: 204 ETEIHNISDSWITAKIKSSFMYSNNINGSDIDVSTNNGVVILTGKVNSGIEQSLAVETAQ 263

Query: 174 NIIGVKQVV 182
           NI GVK V+
Sbjct: 264 NIRGVKSVI 272