Pairwise Alignments

Query, 245 a.a., cytochrome c1 from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit from Pseudomonas fluorescens FW300-N1B4

 Score =  229 bits (583), Expect = 5e-65
 Identities = 123/266 (46%), Positives = 167/266 (62%), Gaps = 30/266 (11%)

Query: 2   KKWIVVLFAMLPSLAMAA-GANVHLDKANNDLTDQASLQNGAKLFMNYCFGCHSTQYQRY 60
           K + V++ A +P L+ A+  +   L+K + D++D+A++Q+GA+ F NYC GCHS ++QRY
Sbjct: 3   KLFAVMILAAMPVLSFASTSSGPELEKVDIDVSDKAAMQDGARTFANYCMGCHSAKFQRY 62

Query: 61  ERVANDLGIPADLMKENLIFDPETKIGQLMENAIPDKSAAKWFGAPPPDLTLVARVRGTD 120
           ERVA+DLGIP +LM E L+F    KIG  M   +    A  WFGA PPDLTLVARVRGTD
Sbjct: 63  ERVADDLGIPHELMLEKLVFTG-AKIGDHMNIGMQPADAKTWFGAAPPDLTLVARVRGTD 121

Query: 121 WLYTYLRSFYTDPSRPFGVNNIVFPSVGMPHVLEELQGTPEPIFETKVVDGNEVQHVVGV 180
           WLY YLRSFY DPSRP+GVNN VFP+VGMP+VL  LQG        +VV   +VQ V   
Sbjct: 122 WLYGYLRSFYEDPSRPWGVNNKVFPNVGMPNVLVGLQG-------RQVVGCKQVQVVEDG 174

Query: 181 KSR---------------------GNGELSEGEYNQAVRDLVNFLEYSGEPMKLERQNLG 219
           K +                       G L+E ++++ V++LV FL YS  P+KL+ Q +G
Sbjct: 175 KKQYDPLTGTALTHEACDQLTVLPKTGTLNEEQFDEKVKNLVTFLAYSANPVKLQHQRIG 234

Query: 220 WWTMGFLVIFTIVVVALKKEYWRDVH 245
            + + +L  F +    LK+EYW+DVH
Sbjct: 235 TYVLLYLAFFFVFAYLLKREYWKDVH 260