Pairwise Alignments

Query, 245 a.a., cytochrome c1 from Vibrio cholerae E7946 ATCC 55056

Subject, 233 a.a., cytochrome c1 (RefSeq) from Shewanella loihica PV-4

 Score =  298 bits (764), Expect = 5e-86
 Identities = 149/246 (60%), Positives = 177/246 (71%), Gaps = 14/246 (5%)

Query: 1   MKKWIVVLFAMLPSLAMAAG-ANVHLDKANNDLTDQASLQNGAKLFMNYCFGCHSTQYQR 59
           MKK ++ L  ++PSLA AAG A+VHL+ AN DL D+ SLQ G   F +YC GCHSTQYQR
Sbjct: 1   MKKLLIALVTLVPSLAFAAGGAHVHLESANVDLKDKESLQRGLDTFQHYCSGCHSTQYQR 60

Query: 60  YERVANDLGIPADLMKENLIFDPETKIGQLMENAIPDKSAAKWFGAPPPDLTLVARVRGT 119
           Y RVA DLGI  D M+   + + + K+G LMENAIP+  AAKWFGA PPDLTLVARVRG 
Sbjct: 61  YNRVAEDLGISVDDMRNKYMLNGDAKVGDLMENAIPEVDAAKWFGAAPPDLTLVARVRGE 120

Query: 120 DWLYTYLRSFYTDPSRPFGVNNIVFPSVGMPHVLEELQGTPEPIFETKVVDGNEVQHVVG 179
           DW+YTYL+SFY D +RPFGVNN VFPSV MPHVL+ELQG      + K  DG+ V     
Sbjct: 121 DWIYTYLKSFYKDETRPFGVNNTVFPSVAMPHVLQELQG-----LQVKQEDGSFV----- 170

Query: 180 VKSRGNGELSEGEYNQAVRDLVNFLEYSGEPMKLERQNLGWWTMGFLVIFTIVVVALKKE 239
                 G+L+  EY+Q VRD+  FL YSGEP+KLER++LGWW MGFL IF IV   LKKE
Sbjct: 171 ---ATGGKLTAEEYDQVVRDITGFLVYSGEPVKLERESLGWWVMGFLFIFFIVAYLLKKE 227

Query: 240 YWRDVH 245
           YW+DVH
Sbjct: 228 YWKDVH 233