Pairwise Alignments

Query, 421 a.a., cytochrome b from Vibrio cholerae E7946 ATCC 55056

Subject, 403 a.a., Cytochrome b subunit of the bc complex from Pseudomonas stutzeri RCH2

 Score =  590 bits (1520), Expect = e-173
 Identities = 288/418 (68%), Positives = 332/418 (79%), Gaps = 17/418 (4%)

Query: 1   MQALLDWVEKRLPAMNAYKKHLSEYPMPKNFNFWYLFGSLAMLVLVNQLLTGIWLTMNYV 60
           M   ++WV+ R PA   ++ HLS+Y  PKNFN  Y FGSLA+LVLVNQ+LTGIWLTM+Y 
Sbjct: 1   MSKFMEWVDARFPATKMWEDHLSKYYAPKNFNVLYFFGSLALLVLVNQILTGIWLTMSYE 60

Query: 61  PSGEGAFASIEYIMRDVEYGWLLRYMHSTGASAFFVVVYLHMFRGLIYGSYQKPRELLWI 120
           PS EGAFAS+EYIMRDVEYGW+LRY+HSTGASAFFVVVYLHMFRG++YGSYQKPREL+WI
Sbjct: 61  PSAEGAFASVEYIMRDVEYGWILRYLHSTGASAFFVVVYLHMFRGILYGSYQKPRELVWI 120

Query: 121 FGMLIFLVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTLWIRGDYVISGAT 180
           FGM+I+L LMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIG DLT WIRGDY+ISG T
Sbjct: 121 FGMMIYLALMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGGDLTQWIRGDYLISGIT 180

Query: 181 LNRFFALHVIALPIVLLLLIVLHILALHEVGSNNPDGIETKLPKGSMGEGYESQFKFHEY 240
           LNRFFALHV+ALPIV+L L+VLHILALHEVGSNNP G++ K  K   G            
Sbjct: 181 LNRFFALHVVALPIVILGLVVLHILALHEVGSNNPLGVDIKKSKDENGVP---------- 230

Query: 241 YTKKYDIIDSIPFHPYGTVKDLIGVAGFLFLFCYVLFFNPEMGGYFLEPPNFEAANPLKT 300
                  +D IPFHPY TVKD++GV  FLF+FC V+FF PEMGGYFLE PNFE AN LKT
Sbjct: 231 -------LDGIPFHPYYTVKDIVGVVVFLFVFCAVVFFFPEMGGYFLEKPNFEEANALKT 283

Query: 301 PEHIAPVWYFTPFYAILRAVPDKLLGVIAMGASIVVLFLLPWLDRCKVRSYRYRSKFHLF 360
           P HIAPVWYFTPFYAILRAVPDKLLGVIAMGA+I VLF+LPWLDR  V+S +Y+      
Sbjct: 284 PAHIAPVWYFTPFYAILRAVPDKLLGVIAMGAAIAVLFVLPWLDRSPVKSMKYKGWMSKV 343

Query: 361 NIAQFTVSFIALGILGALPATPTYTLLAQIFSLCYFMFFVLLFFYSKNEATKPLPTRV 418
            +  F +SF+ LG+LG L  TP  TLL+QI +  YF +F+L+ FY+K E TK +P RV
Sbjct: 344 ALLLFCISFVILGVLGVLSPTPGRTLLSQICTAIYFGYFILMPFYTKLEKTKVVPQRV 401