Pairwise Alignments

Query, 421 a.a., cytochrome b from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., ubiquinol-cytochrome c reductase, cytochrome b (RefSeq) from Shewanella amazonensis SB2B

 Score =  661 bits (1705), Expect = 0.0
 Identities = 316/416 (75%), Positives = 352/416 (84%), Gaps = 17/416 (4%)

Query: 4   LLDWVEKRLPAMNAYKKHLSEYPMPKNFNFWYLFGSLAMLVLVNQLLTGIWLTMNYVPSG 63
           ++DW++ R+P    Y +H+ +Y  PKNFNFWY FGSLA+LVLVNQ+LTGIWLTMNYVP+ 
Sbjct: 5   IIDWIDARIPMTATYNRHVGQYATPKNFNFWYFFGSLALLVLVNQILTGIWLTMNYVPTA 64

Query: 64  EGAFASIEYIMRDVEYGWLLRYMHSTGASAFFVVVYLHMFRGLIYGSYQKPRELLWIFGM 123
           EGAFASIEYIMRDVEYGWLLRYMHSTGASAFFVVVYLHMFRGLIYGSYQKPRELLW+FGM
Sbjct: 65  EGAFASIEYIMRDVEYGWLLRYMHSTGASAFFVVVYLHMFRGLIYGSYQKPRELLWLFGM 124

Query: 124 LIFLVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTLWIRGDYVISGATLNR 183
           LIFLVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTLWIRGDYV+SGATLNR
Sbjct: 125 LIFLVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTLWIRGDYVVSGATLNR 184

Query: 184 FFALHVIALPIVLLLLIVLHILALHEVGSNNPDGIETKLPKGSMGEGYESQFKFHEYYTK 243
           FFALHVIALP+VL++L+ LH++ALHEVGSNNPDGIE K  K   G               
Sbjct: 185 FFALHVIALPLVLVVLVFLHLIALHEVGSNNPDGIEIKKNKDENGWP------------- 231

Query: 244 KYDIIDSIPFHPYGTVKDLIGVAGFLFLFCYVLFFNPEMGGYFLEPPNFEAANPLKTPEH 303
               +D IPFHPY TVKD++GVAGFL +FCYVLFF PE GGYFLE PNFEAANP+KTPEH
Sbjct: 232 ----VDGIPFHPYYTVKDIMGVAGFLIVFCYVLFFMPEGGGYFLEKPNFEAANPMKTPEH 287

Query: 304 IAPVWYFTPFYAILRAVPDKLLGVIAMGASIVVLFLLPWLDRCKVRSYRYRSKFHLFNIA 363
           IAPVWYFTPFYAILRAVP KL GVI MG SI VLFLLPWLDRCKV+S RYRS  H  NIA
Sbjct: 288 IAPVWYFTPFYAILRAVPHKLGGVIMMGLSIAVLFLLPWLDRCKVKSVRYRSMIHKLNIA 347

Query: 364 QFTVSFIALGILGALPATPTYTLLAQIFSLCYFMFFVLLFFYSKNEATKPLPTRVT 419
           QF+VSF+ LG LGA+PA+P  T+ AQ+F++ YF FFV L+ YSKNE TKP+P R+T
Sbjct: 348 QFSVSFVVLGYLGAVPASPALTIAAQVFTITYFGFFVALWVYSKNEKTKPVPARLT 403