Pairwise Alignments

Query, 421 a.a., cytochrome b from Vibrio cholerae E7946 ATCC 55056

Subject, 405 a.a., Cytochrome b/b6-like (NCBI) from Rhodospirillum rubrum S1H

 Score =  399 bits (1026), Expect = e-116
 Identities = 203/416 (48%), Positives = 268/416 (64%), Gaps = 30/416 (7%)

Query: 5   LDWVEKRLPAMNAYKKHLSEYPMPKNFNFWYLFGSLAMLVLVNQLLTGIWLTMNYVPSGE 64
           L W ++RLP +    K L  YP P+N N+++ FGSLA + ++  + TGI+L M+Y    +
Sbjct: 12  LKWFDERLPVLTVAHKELVVYPAPRNLNYFWNFGSLAGIAMIIMIATGIFLAMSYTAHVD 71

Query: 65  GAFASIEYIMRDVEYGWLLRYMHSTGASAFFVVVYLHMFRGLIYGSYQKPRELLWIFGML 124
            AF S+E IMRDV YGWL+RYMH+ GAS FF+VVY+HMFRGL YGSY+ PRE+LW  G++
Sbjct: 72  HAFDSVERIMRDVNYGWLMRYMHANGASMFFIVVYVHMFRGLYYGSYKPPREVLWWLGLV 131

Query: 125 IFLVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTLWIRGDYVISGATLNRF 184
           I L++MA AFMGY+LPWGQMS+WGA VI +LF AIPV+GDD+   + G + +   TLNRF
Sbjct: 132 ILLLMMATAFMGYVLPWGQMSFWGATVITNLFSAIPVVGDDIVTLLWGGFSVDNPTLNRF 191

Query: 185 FALHVIALPIVLLLLIVLHILALHEVGSNNPDGIETKLPKGSMGEGYESQFKFHEYYTKK 244
           F+LH +  P++L  ++ LH+ ALH   SNNP GI+ K P                     
Sbjct: 192 FSLHYL-FPMLLFAVVFLHMWALHVKKSNNPLGIDAKGP--------------------- 229

Query: 245 YDIIDSIPFHPYGTVKDLIGVAGFLFLFCYVLFFNPEMGGYFLEPPNFEAANPLKTPEHI 304
               D+IPFHPY TVKD  G+  FL +FC+ +FF P    +F EP N+  ANP+ TP HI
Sbjct: 230 ---FDTIPFHPYYTVKDAFGLGIFLMVFCFFVFFAP---NFFGEPDNYIPANPMVTPTHI 283

Query: 305 APVWYFTPFYAILRAVPDKLLGVIAMGASIVVLFLLPWLDRCKVRSYRYRSKFHLFNIAQ 364
            P WYF PFYAILRAVPDKL GV+AM  +I++LF+LPWLD  KVRS  +R  F  F    
Sbjct: 284 VPEWYFLPFYAILRAVPDKLGGVLAMFGAILILFVLPWLDTSKVRSATFRPVFKGF-FWV 342

Query: 365 FTVSFIALGILGALPATPTYTLLAQIFSLCYFM-FFVLLFFYSKNEATKPLPTRVT 419
           F    + LG LGA+PA   Y  + Q+ ++ YF+ F V+       E  KPLP  ++
Sbjct: 343 FLADCLLLGYLGAMPAEEPYVTITQLATIYYFLHFLVITPLVGWFEKPKPLPVSIS 398