Pairwise Alignments

Query, 421 a.a., cytochrome b from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., cytochrome b/b6 domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  661 bits (1705), Expect = 0.0
 Identities = 315/417 (75%), Positives = 354/417 (84%), Gaps = 17/417 (4%)

Query: 4   LLDWVEKRLPAMNAYKKHLSEYPMPKNFNFWYLFGSLAMLVLVNQLLTGIWLTMNYVPSG 63
           ++DW++ R+P    Y +H+ +Y  P NFNFWY FGSLAMLVLVNQLLTGIWLTMNYVP+ 
Sbjct: 5   IIDWIDARIPMTATYNRHVGQYATPTNFNFWYFFGSLAMLVLVNQLLTGIWLTMNYVPTA 64

Query: 64  EGAFASIEYIMRDVEYGWLLRYMHSTGASAFFVVVYLHMFRGLIYGSYQKPRELLWIFGM 123
           EGAFASIEYIMRDVEYGWLLRYMHSTGASAFFVVVYLHMFRGLIYGSYQKPRELLW+FGM
Sbjct: 65  EGAFASIEYIMRDVEYGWLLRYMHSTGASAFFVVVYLHMFRGLIYGSYQKPRELLWLFGM 124

Query: 124 LIFLVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTLWIRGDYVISGATLNR 183
           LIFLVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTLWIRGD+V+SGATLNR
Sbjct: 125 LIFLVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTLWIRGDFVVSGATLNR 184

Query: 184 FFALHVIALPIVLLLLIVLHILALHEVGSNNPDGIETKLPKGSMGEGYESQFKFHEYYTK 243
           FFALHVIALP+VL++L+ LH++ALHEVGSNNPDGIE K  K   G            + K
Sbjct: 185 FFALHVIALPLVLVVLVFLHLIALHEVGSNNPDGIEIKKNKDENG------------WPK 232

Query: 244 KYDIIDSIPFHPYGTVKDLIGVAGFLFLFCYVLFFNPEMGGYFLEPPNFEAANPLKTPEH 303
                D IPFHPY TVKD++GVAGFL +FCYVLFF PE GGYFLE PNFEAANP+KTPEH
Sbjct: 233 -----DGIPFHPYYTVKDIMGVAGFLIVFCYVLFFMPEGGGYFLEKPNFEAANPMKTPEH 287

Query: 304 IAPVWYFTPFYAILRAVPDKLLGVIAMGASIVVLFLLPWLDRCKVRSYRYRSKFHLFNIA 363
           IAPVWYFTPFYAILRA+PDKLLGV+ MG +I VLF+LPWLDRCKV+S RYRS  H  NI 
Sbjct: 288 IAPVWYFTPFYAILRAIPDKLLGVVGMGLAIAVLFVLPWLDRCKVKSIRYRSMIHKLNIG 347

Query: 364 QFTVSFIALGILGALPATPTYTLLAQIFSLCYFMFFVLLFFYSKNEATKPLPTRVTY 420
           QF VSF+ LG LGA+PATPT T+ A++F+L YF FF+ L+ YSKNE TKP+P R+T+
Sbjct: 348 QFAVSFVILGYLGAVPATPTLTIAARVFTLTYFGFFLALWLYSKNEKTKPVPERLTH 404