Pairwise Alignments

Query, 421 a.a., cytochrome b from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., Cytochrome b/b6 domain (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  341 bits (874), Expect = 3e-98
 Identities = 185/414 (44%), Positives = 246/414 (59%), Gaps = 42/414 (10%)

Query: 7   WVEKRLPAMNAYKKHLSEYPMPKNFNFWYLFGSLAMLVLVNQLLTGIWLTMNYVPSGEGA 66
           W+  RLP +      +   P PKN N+ +++G + M  L+ Q++TGI L M+YVP  + A
Sbjct: 18  WIHSRLPIVGLIYDTIM-IPTPKNLNWMWIWGIVLMFCLILQIVTGIVLVMHYVPHVDMA 76

Query: 67  FASIEYIMRDVEYGWLLRYMHSTGASAFFVVVYLHMFRGLIYGSYQKPRELLWIFGMLIF 126
           FAS+E+IMR+V  G +LRY+H  GAS FFV VYLH+FR L YGSY+ PRE+ WI GMLI+
Sbjct: 77  FASVEHIMRNVNGGHMLRYLHMNGASLFFVAVYLHIFRNLYYGSYKAPREITWIIGMLIY 136

Query: 127 LVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTLWIRGDYVISGATLNRFFA 186
           L++MA AFMGY+LPWGQMS+WGA VI  LFGAIP +GD L  W+ G   +  ATL RFF+
Sbjct: 137 LLMMATAFMGYVLPWGQMSFWGATVITGLFGAIPFVGDALQTWLLGGPAVDNATLTRFFS 196

Query: 187 LHVIALPIVLLLLIVLHILALHEVGSNNPDGIETKLPKGSMGEGYESQFKFHEYYTKKYD 246
           LH + LP V+L L ++H+ A H  G+NNP G+E +       E                 
Sbjct: 197 LHYL-LPFVILGLSIVHVWAFHTTGNNNPTGVEVRRTSKEEAER---------------- 239

Query: 247 IIDSIPFHPYGTVKDLIGVAGFLFLFCYVLFFNPEMGGYFLEPPNFEAANPLKTPEHIAP 306
             D++PF PY  +KDL  +A  + +F  V+ F P    Y   P N+  ANPL TP HI P
Sbjct: 240 --DTLPFWPYFVIKDLFALAVIMVVFFAVVGFMP---NYLGHPDNYIEANPLVTPSHIVP 294

Query: 307 VWYFTPFYAILRA-VPD-----------------KLLGVIAMGASIVVLFLLPWLDRCKV 348
            WYF PFYAILRA  PD                    GV+AM  +I V+ L PWLD   V
Sbjct: 295 EWYFLPFYAILRAFTPDVWVVMFASWITGGIIDAAFFGVLAMFGAIAVMALAPWLDTSSV 354

Query: 349 RSYRYRSKFHLFNIAQFTVSFIALGILGALPATPTYTLLAQIFSLCYFMFFVLL 402
           RS RYR  F  +    F V+F+ L  +GA+PA   Y ++A I S  +F +F+++
Sbjct: 355 RSGRYRPMFKWW-FWLFIVNFVVLTWVGAMPAEGIYPIIALIGSAYWFAYFLVI 407