Pairwise Alignments

Query, 421 a.a., cytochrome b from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., cytochrome B from Burkholderia phytofirmans PsJN

 Score =  505 bits (1300), Expect = e-147
 Identities = 255/463 (55%), Positives = 310/463 (66%), Gaps = 62/463 (13%)

Query: 4   LLDWVEKRLPAMNAYKKHLSEYPMPKNFNFWYLFGSLAMLVLVNQLLTGIWLTMNYVPSG 63
           L+ W+++R P  + +KKH+SEY  PKNFNFWY FGSLA+LVLVNQ++TGI+LTMNY P  
Sbjct: 12  LVGWIDRRFPLTSTWKKHVSEYYAPKNFNFWYFFGSLALLVLVNQIVTGIFLTMNYKPDA 71

Query: 64  EGAFASIEYIMRDVEYGWLLRYMHSTGASAFFVVVYLHMFRGLIYGSYQKPRELLWIFGM 123
             AF+S+EYIMR+V +GWL+RYMHSTGAS FFVVVYLHMFRGL+YGSY+KPREL+WIFG 
Sbjct: 72  TLAFSSVEYIMREVPWGWLIRYMHSTGASMFFVVVYLHMFRGLMYGSYRKPRELVWIFGC 131

Query: 124 LIFLVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTLWIRGDYVISGATLNR 183
            IFL LMAEAF GYLLPWGQMS+WGAQVI++LF AIP IG DL+LWIRGDYV+S  TLNR
Sbjct: 132 AIFLCLMAEAFFGYLLPWGQMSFWGAQVIVNLFSAIPFIGPDLSLWIRGDYVVSDVTLNR 191

Query: 184 FFALHVIALPIVLLLLIVLHILALHEVGSNNPDGIETKLPKGSMGEGYESQFKFHEYYTK 243
           FFA HVIA+P+VL+ L+V H++ALHEVGSNNPDGIE K  K   G               
Sbjct: 192 FFAFHVIAIPLVLIGLVVAHLVALHEVGSNNPDGIEIKAKKDPDGIP------------- 238

Query: 244 KYDIIDSIPFHPYGTVKDLIGVAGFLFLFCYVLFFNPEMGGYFLEPPNFEAANPLKTPEH 303
               ID IPFHPY +V D +GV+ FL +F  ++FF PEMGGYFLE  NF  ANPL+TP  
Sbjct: 239 ----IDGIPFHPYYSVHDFMGVSVFLLIFAAIIFFAPEMGGYFLEANNFVPANPLQTPPE 294

Query: 304 IAPVWYFTPFYAILRAVPD----------------------------------------- 322
           IAPVWYFT FYA+LRA  D                                         
Sbjct: 295 IAPVWYFTAFYAMLRATTDPFKIVLMVIIGLLGLLALVRARGKWKLGLPVLAVLVILAMA 354

Query: 323 ----KLLGVIAMGASIVVLFLLPWLDRCKVRSYRYRSKFHLFNIAQFTVSFIALGILGAL 378
               K  GV+ MG+++V LF LPWLDR  V+S RYR  FH      F + F+ L  LG  
Sbjct: 355 FTESKFWGVVVMGSAVVSLFFLPWLDRSPVKSIRYRPFFHKVFYGIFVLVFLTLAFLGTK 414

Query: 379 PATPTYTLLAQIFSLCYFMFFVLLFFYSKNEATKPLPTRVTYK 421
           P +PT TL+AQ+ +L YF FF+ + F+++    K  P RV +K
Sbjct: 415 PPSPTATLIAQVCALIYFAFFLGMPFWTRLGTFKQPPERVRFK 457