Pairwise Alignments

Query, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., periplasmic serine protease, Do/DeqQ family from Pseudomonas stutzeri RCH2

 Score =  259 bits (661), Expect = 2e-73
 Identities = 163/425 (38%), Positives = 245/425 (57%), Gaps = 29/425 (6%)

Query: 38  IPSLAPMLEKVTPAVVSIAVEGTQVSR---------QRLPDQFRFFFGPDFPTE-----Q 83
           +P   P++E  +PAVV+I+ +    +R         + LP  FR FF    P       +
Sbjct: 27  LPDFTPLVESASPAVVNISTKQKVPARGATAQMPELEGLPPIFREFFEHSIPQMPGAPGR 86

Query: 84  LQERPFRGLGSGVIINADKGYVVTNYHVINGAEKIRVKLYDGREFDAELVGGDEMSDVAL 143
            Q+R  + LGSG II+ D GYV+TN HV+ GA++I V+L D  E +A+L+G D  SDVA+
Sbjct: 87  GQQREAQSLGSGFIIS-DDGYVLTNNHVVAGADEIIVRLPDRSELEAKLIGADPRSDVAV 145

Query: 144 LKLNKAKNLTEIRIADSDKLRVGDFAVAIGNPFGLGQTVTSGIVSALGRSGLNIENFENF 203
           LK+ + K L  ++I  SD+L+ G++ +AIG+PFG   TVT+GIVSA GRS  N E++  F
Sbjct: 146 LKV-EGKGLPTVKIGRSDELKAGEWVLAIGSPFGFDHTVTAGIVSATGRSLPN-ESYVPF 203

Query: 204 IQTDAAINSGNSGGALVNLNGELIGINTAILGPNGGNVGIGFAIPSNMMKNLTDQILEFG 263
           IQTD AIN GNSGG L NL GE++GIN+ I   +GG +G+ FAIP ++  ++ +Q+   G
Sbjct: 204 IQTDVAINPGNSGGPLFNLKGEVVGINSQIFTRSGGFMGLSFAIPIDVAMDVANQLRTDG 263

Query: 264 EVKRGMLGVQGGEITSELADALGYESSKGAFVSQVVPDSAADKAGIKAGDIITSLNGKKI 323
           +V RG LGV   E+  +LA++ G E   GA V+QV+    A ++G++ GD+I SLNGK I
Sbjct: 264 KVNRGWLGVVIQEVNKDLAESFGLERPAGALVAQVMDGGPAARSGLRVGDVILSLNGKPI 323

Query: 324 DTFSELRAKVATLGAGKTITLGVLRDGKNQNIDVTL------GEQQNAKTKAESLHQGLS 377
              ++L   V  L  G    + V+RDG  + +DV++      GE   A    +       
Sbjct: 324 VMSADLPHLVGALKPGSKARMEVVRDGDRKMLDVSIGAMPEEGEPVAASGGGQERSDNRL 383

Query: 378 GAELSNTTDS-----DPIQGVKVTEVQKGSAAESYQLQKDDIIIGVNRKRVKNIAELRAI 432
           G +++  T+      D   GV +TE+  G AA    L+  D+I  +N + + + A    +
Sbjct: 384 GVKVTELTEEQKKSLDLPGGVVITEILNGPAA-MIGLRPGDVITHLNNQAINSAATFGRV 442

Query: 433 MEKSP 437
            E+ P
Sbjct: 443 AEQLP 447



 Score = 39.3 bits (90), Expect = 3e-07
 Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 3/92 (3%)

Query: 270 LGVQGGEITSELADALGYESSKGAFVSQVVPDSAADKAGIKAGDIITSLNGKKIDTFSEL 329
           LGV+  E+T E   +L      G  +++++   AA   G++ GD+IT LN + I++ +  
Sbjct: 383 LGVKVTELTEEQKKSLDLPG--GVVITEILNGPAA-MIGLRPGDVITHLNNQAINSAATF 439

Query: 330 RAKVATLGAGKTITLGVLRDGKNQNIDVTLGE 361
                 L   +++++ VLR G+   I   L E
Sbjct: 440 GRVAEQLPKNRSVSMRVLRQGRASFITFKLAE 471