Pairwise Alignments

Query, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

Subject, 508 a.a., Peptidase S1C, Do (NCBI) from Rhodospirillum rubrum S1H

 Score =  278 bits (711), Expect = 3e-79
 Identities = 181/473 (38%), Positives = 257/473 (54%), Gaps = 57/473 (12%)

Query: 27  AALPLSVNGEQIP-SLAPMLEKVTPAVVSIAVEGTQVSRQRLPDQ------------FRF 73
           A  P S    +IP S A + E + PAVV+I+   T +   R P+             F+ 
Sbjct: 34  AIAPFSAQAREIPESFADLAEGLLPAVVNISTTQT-IDADRGPEMPQFPPGSPFEEFFKD 92

Query: 74  FF----GPDFPTEQLQERPFRGLGSGVIINADKGYVVTNYHVINGAEKIRVKLYDGREFD 129
           FF    GP    +    R    LGSG I++A  GY+VTN HVI  A++I V L+D     
Sbjct: 93  FFERHGGPGGGVQPKTPRRATSLGSGFIVDA-AGYIVTNNHVIQDADEITVILHDDTAIK 151

Query: 130 AELVGGDEMSDVALLKLNKAKNLTEIRIADSDKLRVGDFAVAIGNPFGLGQTVTSGIVSA 189
           AELVG DE +DVALL++   K LT +   +S+  RVGD+ +AIGNPFGLG TVT+GI+SA
Sbjct: 152 AELVGKDEKTDVALLRIKTDKPLTAVPWGNSEAARVGDWVMAIGNPFGLGGTVTAGIISA 211

Query: 190 LGRSGLNIENFENFIQTDAAINSGNSGGALVNLNGELIGINTAILGPNGGNVGIGFAIPS 249
             R  +N   +++FIQTDAAIN GNSGG L N++GE+IGINTAI  P+GG++GIGF++PS
Sbjct: 212 KTRD-INAGPYDSFIQTDAAINKGNSGGPLFNMHGEVIGINTAIFSPSGGSIGIGFSVPS 270

Query: 250 NMMKNLTDQILEFGEVKRGMLGVQGGEITSELADALGYESSKGAFVSQVVPDSAADKAGI 309
           N+   + D I +FG  +RG +GV+   +T E+A+ LG E S GA ++ V P   A  AG+
Sbjct: 271 NLAHQVIDDIKKFGRTRRGWIGVRIQSVTDEIAEGLGLEKSAGALIAAVTPGGPAAAAGL 330

Query: 310 KAGDIITSLNGKKIDTFSELRAKVATLGAGKTITLGVLRDGKNQNIDVTLGEQQNAKTKA 369
           K GD+I S +G+ +     L   VA    GK   +GV R+GK Q++ + +GE + A+ + 
Sbjct: 331 KVGDVIVSFDGRPVPDMRTLPRIVAETEIGKDAAIGVWREGKRQDLKMKVGELEVAEDEG 390

Query: 370 ESLHQGLSGAELSNTTDSD---------------------------PIQGVKVTEVQKGS 402
                 L+  E S  TDS                              +GV VT+V   S
Sbjct: 391 L-----LNEPETSGVTDSQGGTAVATIGLTVTKLDDRLRSQFGFDAASEGVVVTDVTNES 445

Query: 403 AAESYQLQKDDIIIGVNRKRVKNIAEL-----RAIMEKSPNILALNIQRGERT 450
            A+   L+   +I+ +N+  V +  ++     +A  E    +L L   RG RT
Sbjct: 446 DAQEKGLEPGTLIVKINQTEVASPEDVVKAVAKAKDEGRKTVLLLVELRGTRT 498