Pairwise Alignments

Query, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., peptidase (NCBI) from Rhodospirillum rubrum S1H

 Score =  291 bits (746), Expect = 2e-83
 Identities = 159/341 (46%), Positives = 232/341 (68%), Gaps = 5/341 (1%)

Query: 24  PATAALPLSVNGEQ-IPSLAPMLEKVTPAVVSIAVEGTQVSRQR--LPDQ-FRFFFGPDF 79
           P+ A  P+ + GE+ + +LAP LE VTPAVV+IAV+ T  +R    L D  FR FFG   
Sbjct: 41  PSLALTPVFMVGEEGVLTLAPTLEIVTPAVVNIAVKATVAARPNPLLSDPLFRQFFGVPP 100

Query: 80  PTEQLQERPFRGLGSGVIINADKGYVVTNYHVINGAEKIRVKLYDGREFDAELVGGDEMS 139
             E  +ER     GSGVI++A +G ++TN+HV++GAE I V L D R   A L+G D  +
Sbjct: 101 GAEGPRERTVVSAGSGVIVDAVRGTILTNHHVVDGAEDITVTLKDRRVLKATLLGSDPGT 160

Query: 140 DVALLKLNKAKNLTEIRIADSDKLRVGDFAVAIGNPFGLGQTVTSGIVSALGRSGLNIEN 199
           D+A+L++ KA  LT + +ADSD+ +VGD  +AIGNPFGLGQTVT+G++SA GRSG+  + 
Sbjct: 161 DIAVLRV-KADRLTALHLADSDRAQVGDLTIAIGNPFGLGQTVTTGVISAKGRSGVIPDG 219

Query: 200 FENFIQTDAAINSGNSGGALVNLNGELIGINTAILGPNGGNVGIGFAIPSNMMKNLTDQI 259
           +E+F+QTDA+IN GNSGGALVN  G+L+GINTAIL   GG+VGIGFAIPSN+ + + +QI
Sbjct: 220 YEDFLQTDASINPGNSGGALVNSRGDLVGINTAILSSGGGSVGIGFAIPSNIARAVMEQI 279

Query: 260 LEFGEVKRGMLGVQGGEITSELADALGYESSKGAFVSQVVPDSAADKAGIKAGDIITSLN 319
           L+ G V+RG LGV    ++  +A++LG   + G  ++ V   S A+K G++ GD+I +++
Sbjct: 280 LKDGTVRRGHLGVSIQTVSPAVAESLGLPRAAGVIIAAVERGSTAEKVGLRTGDVILAVD 339

Query: 320 GKKIDTFSELRAKVATLGAGKTITLGVLRDGKNQNIDVTLG 360
           G+  +T   LR ++     G  + L V+R+GK+ ++   +G
Sbjct: 340 GRPSETAEVLRRQIGLAQIGDRVRLTVMREGKSFDLQARIG 380



 Score = 28.5 bits (62), Expect = 4e-04
 Identities = 45/194 (23%), Positives = 79/194 (40%), Gaps = 31/194 (15%)

Query: 239 GNVGIGFAIPSNMMKNLTDQILEFGEVKRGMLGV--QGGEITSELADALGYESSKGAFVS 296
           G++ I    P  + + +T  ++      +G  GV   G E   +   ++   +S GA V+
Sbjct: 186 GDLTIAIGNPFGLGQTVTTGVIS----AKGRSGVIPDGYEDFLQTDASINPGNSGGALVN 241

Query: 297 QVVPDSAADKAGIKAGDIITSLNGKKIDTFSELRAKVATLGAGKTITLGVLRDGKNQNID 356
                S  D  GI     I S  G  +     + + +A     + +   +L+DG  +   
Sbjct: 242 -----SRGDLVGINTA--ILSSGGGSVGIGFAIPSNIA-----RAVMEQILKDGTVRRGH 289

Query: 357 VTLGEQQNAKTKAESLHQGLSGAELSNTTDSDPIQGVKVTEVQKGSAAESYQLQKDDIII 416
           + +  Q  +   AESL  GL  A            GV +  V++GS AE   L+  D+I+
Sbjct: 290 LGVSIQTVSPAVAESL--GLPRAA-----------GVIIAAVERGSTAEKVGLRTGDVIL 336

Query: 417 GVNRKRVKNIAELR 430
            V+ +  +    LR
Sbjct: 337 AVDGRPSETAEVLR 350