Pairwise Alignments

Query, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., Do family serine endopeptidase from Rhodopseudomonas palustris CGA009

 Score =  273 bits (699), Expect = 7e-78
 Identities = 178/460 (38%), Positives = 265/460 (57%), Gaps = 47/460 (10%)

Query: 8   VLTALSLSLSAILSPLPATAALPLSVNGEQIPSLAPMLEKVTPAVVSIAVEGTQVSR--- 64
           +L AL L  + I  P PA+A  P          +A + EKV  AVV+I+   T  ++   
Sbjct: 19  LLAALCLGAAVIAGPAPASARGP--------EGIADVAEKVIDAVVNISTTQTVDAKGSG 70

Query: 65  -------QRLP--DQFRFFFGPDFPTEQLQE----RPFRGLGSGVIINADKGYVVTNYHV 111
                   +LP    F  FF   F   + ++    R    LGSG II+   G VVTN HV
Sbjct: 71  ESKGGAAPQLPPGSPFEEFFEDFFKNRRGEKGGGPRKTNSLGSGFIIDP-AGVVVTNNHV 129

Query: 112 INGAEKIRVKLYDGREFDAELVGGDEMSDVALLKLNK--AKNLTEIRIADSDKLRVGDFA 169
           I  +++I V L DG +  AELVG D+ +D+A+LK      K LT ++  DSDKLR+G++ 
Sbjct: 130 IADSDEINVILNDGTKIKAELVGVDKKTDLAVLKFKPPAGKTLTAVKFGDSDKLRLGEWV 189

Query: 170 VAIGNPFGLGQTVTSGIVSALGRSGLNIENFENFIQTDAAINSGNSGGALVNLNGELIGI 229
           +AIGNPF LG TVT+GIVSA  R  +N   ++++IQTDAAIN GNSGG L NL GE+IG+
Sbjct: 190 IAIGNPFSLGGTVTAGIVSARNRD-INSGPYDSYIQTDAAINRGNSGGPLFNLAGEVIGV 248

Query: 230 NTAILGPNGGNVGIGFAIPSNMMKNLTDQILEFGEVKRGMLGVQGGEITSELADALGYES 289
           NT I+ P+GG++GIGFA+PS  +  + DQ+ +FGE++RG LGV+  ++T E+A++L  + 
Sbjct: 249 NTLIISPSGGSIGIGFAVPSKTVVPVVDQLRQFGELRRGWLGVRIQQVTDEIAESLSIKP 308

Query: 290 SKGAFVSQVVPDSAADKAGIKAGDIITSLNGKKIDTFSELRAKVATLGAGKTITLGVLRD 349
           ++GA V+ V     A  AGI+ GD++   +GK I    +L   VA    GKT+ + V+R 
Sbjct: 309 ARGALVAGVDDKGPAKPAGIEPGDVVVKFDGKDIKEPKDLSRIVADTAVGKTVDVVVIRK 368

Query: 350 GKNQNIDVTLG--------EQQNAKTKAES---LHQGLSGAELSNTTD--------SDPI 390
           GK +   VTLG        +  +AK++ E+   + Q + G +L+  +          D +
Sbjct: 369 GKEETKQVTLGRLDDDAKPQPASAKSQPEADKPVTQKVLGLDLAALSKDLRGRYKIKDSV 428

Query: 391 QGVKVTEVQKGSAAESYQLQKDDIIIGVNRKRVKNIAELR 430
           +GV VT V  GS A   +L   D+I+ V ++ V + A+++
Sbjct: 429 KGVLVTGVDDGSDAAEKRLSAGDVIVEVAQESVGSAADIK 468



 Score = 26.2 bits (56), Expect = 0.003
 Identities = 13/49 (26%), Positives = 27/49 (55%)

Query: 288 ESSKGAFVSQVVPDSAADKAGIKAGDIITSLNGKKIDTFSELRAKVATL 336
           +S KG  V+ V   S A +  + AGD+I  +  + + + ++++ +V  L
Sbjct: 426 DSVKGVLVTGVDDGSDAAEKRLSAGDVIVEVAQESVGSAADIKKRVDQL 474