Pairwise Alignments

Query, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., protease Do (RefSeq) from Shewanella loihica PV-4

 Score =  540 bits (1392), Expect = e-158
 Identities = 277/456 (60%), Positives = 356/456 (78%), Gaps = 7/456 (1%)

Query: 2   MKKPLLVLTALSLSLSAILSPLPATAALPLSVNGEQIPSLAPMLEKVTPAVVSIAVEGTQ 61
           MK  L +L+A  L  S ++ P  + AA+PL+V G+ +PSLAPMLEK TPAVV++AV GT 
Sbjct: 1   MKTKLSLLSAALLGASLMVMPAVSQAAIPLAVEGQALPSLAPMLEKTTPAVVAVAVSGTH 60

Query: 62  VSRQRLPDQFRFFFGPDFPTEQLQERPFRGLGSGVIINADKGYVVTNYHVINGAEKIRVK 121
           VS+QRLPD FR+FFGP+ P EQ+QERPF+GLGSGVII+A KGY+VTN HVI GA++I + 
Sbjct: 61  VSKQRLPDAFRYFFGPNAPREQVQERPFKGLGSGVIIDAKKGYIVTNNHVIEGADEILIG 120

Query: 122 LYDGREFDAELVGGDEMSDVALLKLNKAKNLTEIRIADSDKLRVGDFAVAIGNPFGLGQT 181
           L+DGRE +A+L+G D  SDVALL++ +AKNL  ++ ADSD+L+VGDFAVAIGNPFGLGQT
Sbjct: 121 LHDGREIEAKLIGTDAESDVALLQI-EAKNLVALKRADSDELKVGDFAVAIGNPFGLGQT 179

Query: 182 VTSGIVSALGRSGLNIENFENFIQTDAAINSGNSGGALVNLNGELIGINTAILGPNGGNV 241
           VTSGIVSA+GRSGL IE  ENFIQTDAAINSGNSGGALVNLNGELIGINTAI+ P GGNV
Sbjct: 180 VTSGIVSAMGRSGLGIEMLENFIQTDAAINSGNSGGALVNLNGELIGINTAIVAPGGGNV 239

Query: 242 GIGFAIPSNMMKNLTDQILEFGEVKRGMLGVQGGEITSELADALGYESSKGAFVSQVVPD 301
           GIGFAIP+NM+ NL DQ++E GEV+RG+LGV G ++ SELA   G +S  G FV++V+PD
Sbjct: 240 GIGFAIPANMVNNLVDQLIEHGEVRRGVLGVSGRDLDSELAQGFGLDSQHGGFVNEVMPD 299

Query: 302 SAADKAGIKAGDIITSLNGKKIDTFSELRAKVATLGAGKTITLGVLRDGKNQNIDVTLGE 361
           SAADKAGIKAGDII S+N K I +F ELRAK+ T+GAG  + LG++RDG  + +   LGE
Sbjct: 300 SAADKAGIKAGDIIVSVNDKPIKSFQELRAKIGTMGAGAKVKLGLIRDGDEKTVTAVLGE 359

Query: 362 -QQNAKTKAESLHQGLSGAELSNTTDSDPIQGVKVTEVQKGSAAESYQLQKDDIIIGVNR 420
             Q  +T A ++H  L+GA L N       +GV++TE+ +GS A +  L K DII+GVNR
Sbjct: 360 ASQQTETAAGAVHPMLAGATLENNK-----KGVEITEIAQGSPAAASGLLKGDIIVGVNR 414

Query: 421 KRVKNIAELRAIMEKSPNILALNIQRGERTLYLVVR 456
            R++++ EL+A +++    +AL + RG+ +LYLV+R
Sbjct: 415 TRIEDLKELKAELKEQHGAVALKLLRGDNSLYLVLR 450