Pairwise Alignments

Query, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., periplasmic serine protease, Do/DeqQ family from Dechlorosoma suillum PS

 Score =  261 bits (666), Expect = 4e-74
 Identities = 155/351 (44%), Positives = 216/351 (61%), Gaps = 13/351 (3%)

Query: 15  SLSAILSPLPATAALPLSVNGEQIPSLAPMLEKVTPAVVSIAV-EGTQVSRQRLPDQ--F 71
           S+ A+    PA A       G  +      + +  P+VV I   +  + SR  L D   F
Sbjct: 35  SVVALQEAAPAAAD-----GGAGLGGFREAVRRSLPSVVYIFTSKEVKSSRHPLFDDPVF 89

Query: 72  RFFFGPDFPTEQLQERPFRGLGSGVIINADKGYVVTNYHVINGAEKIRVKLYDGREFDAE 131
           R FFG  F  E  +     GLGSGVI++ + GY++TNYHV+  A+ I V + DGR+  A+
Sbjct: 90  RHFFGDRFDNEPQRSS---GLGSGVIVSPE-GYILTNYHVVEAADDIEVAVNDGRKLKAK 145

Query: 132 LVGGDEMSDVALLKLNKAKNLTEIRIADSDKLRVGDFAVAIGNPFGLGQTVTSGIVSALG 191
           ++G D  +D+A+LK+N A  L  I     D +RVGD  +AIGNPFG+GQTVT GIVSALG
Sbjct: 146 VIGSDPETDLAVLKVN-ADKLPAIVFGQMDGIRVGDVVLAIGNPFGVGQTVTMGIVSALG 204

Query: 192 RSGLNIENFENFIQTDAAINSGNSGGALVNLNGELIGINTAILGPNGGNVGIGFAIPSNM 251
           RS L I  FENFIQTDAAIN GNSGGALV+  G LIGINTAI   +GG++GIGFAIP + 
Sbjct: 205 RSHLGINTFENFIQTDAAINPGNSGGALVDAQGNLIGINTAIYSRSGGSLGIGFAIPVST 264

Query: 252 MKNLTDQILEFGEVKRGMLGVQGGEITSELADALGYESSKGAFVSQVVPDSAADKAGIKA 311
            K++ +QI++ G V RG +GV+  EIT+ELA++ G   + GA ++ V+  S AD AGIK 
Sbjct: 265 AKSIMEQIIQTGTVTRGWIGVEAQEITAELAESFGLPDASGALIAGVLRGSPADGAGIKP 324

Query: 312 GDIITSLNGKKIDTFSELRAKVATLGAGKTITLGVLRDGKNQNIDVTLGEQ 362
           GDI+ ++ GK++     +   +A L  G ++   + R+       V +G++
Sbjct: 325 GDILLAVGGKEVKDPQVMLDLIAELKPGASVPFKLRRNQSLLEPQVRIGKR 375



 Score = 27.7 bits (60), Expect = 7e-04
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 7/59 (11%)

Query: 379 AELSNTTDSDPIQGVKVTEVQKGSAAESYQLQKDDIIIGVNRKRVKN-------IAELR 430
           AEL+ +       G  +  V +GS A+   ++  DI++ V  K VK+       IAEL+
Sbjct: 292 AELAESFGLPDASGALIAGVLRGSPADGAGIKPGDILLAVGGKEVKDPQVMLDLIAELK 350