Pairwise Alignments

Query, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., serine protease, HtrA/DegQ/DegS family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  532 bits (1371), Expect = e-156
 Identities = 277/456 (60%), Positives = 352/456 (77%), Gaps = 7/456 (1%)

Query: 2   MKKPLLVLTALSLSLSAILSPLPATAALPLSVNGEQIPSLAPMLEKVTPAVVSIAVEGTQ 61
           MK  L VL+A  L+ +  + P  + AA+P SV G+ IPSLAPMLE+ TPAVVS+AV GT 
Sbjct: 1   MKTKLSVLSAAMLAATLTMMPAVSQAAIPQSVEGQSIPSLAPMLERTTPAVVSVAVSGTH 60

Query: 62  VSRQRLPDQFRFFFGPDFPTEQLQERPFRGLGSGVIINADKGYVVTNYHVINGAEKIRVK 121
           VS+QR+PD FR+FFGP+ P EQ+QERPFRGLGSGVII+ADKGY+VTN HVI+GA+ I+V 
Sbjct: 61  VSKQRVPDVFRYFFGPNAPQEQVQERPFRGLGSGVIIDADKGYIVTNNHVIDGADDIQVG 120

Query: 122 LYDGREFDAELVGGDEMSDVALLKLNKAKNLTEIRIADSDKLRVGDFAVAIGNPFGLGQT 181
           L+DGRE  A+L+G D  SD+ALL++ +AKNL  I+ +DSD+LRVGDFAVAIGNPFGLGQT
Sbjct: 121 LHDGREVKAKLIGTDSESDIALLQI-EAKNLVAIKTSDSDELRVGDFAVAIGNPFGLGQT 179

Query: 182 VTSGIVSALGRSGLNIENFENFIQTDAAINSGNSGGALVNLNGELIGINTAILGPNGGNV 241
           VTSGIVSALGRSGL IE  ENFIQTDAAINSGNSGGALVNL GELIGINTAI+ PNGGNV
Sbjct: 180 VTSGIVSALGRSGLGIEMLENFIQTDAAINSGNSGGALVNLKGELIGINTAIVAPNGGNV 239

Query: 242 GIGFAIPSNMMKNLTDQILEFGEVKRGMLGVQGGEITSELADALGYESSKGAFVSQVVPD 301
           GIGFAIP+NM+KNL  QI E GEV+RG+LG+ G ++ S+LA   G ++  G FV++V   
Sbjct: 240 GIGFAIPANMVKNLIAQIAEHGEVRRGVLGIAGRDLDSQLAQGFGLDTQHGGFVNEVSAG 299

Query: 302 SAADKAGIKAGDIITSLNGKKIDTFSELRAKVATLGAGKTITLGVLRDGKNQNIDVTLGE 361
           SAA+KAGIKAGDII S++G+ I +F ELRAKVAT+GAG  + LG++RDG  + ++VTLGE
Sbjct: 300 SAAEKAGIKAGDIIVSVDGRAIKSFQELRAKVATMGAGAKVELGLIRDGDKKTVNVTLGE 359

Query: 362 -QQNAKTKAESLHQGLSGAELSNTTDSDPIQGVKVTEVQKGSAAESYQLQKDDIIIGVNR 420
             Q  +  A ++H  L GA L N +     +GV++T+V +GS A    LQK D+I+G+NR
Sbjct: 360 ANQTTEKAAGAVHPMLQGASLENAS-----KGVEITDVAQGSPAAMSGLQKGDLIVGINR 414

Query: 421 KRVKNIAELRAIMEKSPNILALNIQRGERTLYLVVR 456
             VK++  L+ +++     +AL I RG+  LYLV+R
Sbjct: 415 TAVKDLKSLKELLKDQEGAVALKIVRGKSMLYLVLR 450