Pairwise Alignments

Query, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., protease Do (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  269 bits (687), Expect = 2e-76
 Identities = 180/487 (36%), Positives = 270/487 (55%), Gaps = 53/487 (10%)

Query: 5   PLLVLTALSLSLSAILSPLPATAALPLSVNGEQIP-SLAPMLEKVTPAVVSIAVEGTQVS 63
           P  V  A   +  A+L+ L    A  L V   +IP S A + E+V+PAVV+I    T V+
Sbjct: 20  PAGVPRAAQAAAGALLA-LALLLAQTLIVQAREIPGSFADLAERVSPAVVNITTS-TNVA 77

Query: 64  R-----------QRLPDQFRFFFGPDFPTEQLQE-------RPFRGLGSGVIINADKGYV 105
                         L D FR     DF   Q Q+       R    LGSG +I+ D GY+
Sbjct: 78  TPGGPQPMVPEGSPLEDFFR-----DFMDRQEQDGRPAPRQRRSNALGSGFVISED-GYI 131

Query: 106 VTNYHVINGAEKIRVKLYDGREFDAELVGGDEMSDVALLKLNKAKNLTEIRIADSDKLRV 165
           VTN HVI  A++I ++ + G E  AE+VG D  +D+ALLK+     L  +   DSD  RV
Sbjct: 132 VTNNHVIEQADEILIEFFSGEELAAEVVGTDPNTDIALLKVESDTPLPFVTFGDSDAARV 191

Query: 166 GDFAVAIGNPFGLGQTVTSGIVSALGRSGLNIENFENFIQTDAAINSGNSGGALVNLNGE 225
           GD+ +A+GNP G G +V++GIVSA  R+      ++++IQTDAAIN GNSGG L N++GE
Sbjct: 192 GDWVMAVGNPLGQGFSVSAGIVSARNRALSG--TYDDYIQTDAAINRGNSGGPLFNMDGE 249

Query: 226 LIGINTAILGPNGGNVGIGFAIPSNMMKNLTDQILEFGEVKRGMLGVQGGEITSELADAL 285
           +IG+NTAIL PNGG++GIGF++ + ++ N+ DQ+ EFGE +RG LGV+  ++T ++A+AL
Sbjct: 250 VIGVNTAILSPNGGSIGIGFSMAAGVVTNVVDQLKEFGETRRGWLGVRIQDVTDDVAEAL 309

Query: 286 GYESSKGAFVSQVVPDSAADKAGIKAGDIITSLNGKKIDTFSELRAKVATLGAGKTITLG 345
           G E + GA V+  VPD  +  AG++AGD+I + +G+ ++   EL   V     GK + + 
Sbjct: 310 GLEQAAGALVTD-VPDGPSLDAGMEAGDVILTFDGRDVEDTRELVQIVGNTAVGKAVRVV 368

Query: 346 VLRDGKNQNIDVTLGEQQ--------NAKTKAESLHQGLSGAELSNTTDSDPIQ------ 391
           V RDG  Q + VTLG ++        +A    E L + + G  +S  TD    Q      
Sbjct: 369 VFRDGATQTLLVTLGRREEAERAIPASASADEEILEKEIMGLTVSELTDELREQLGIAAS 428

Query: 392 --GVKVTEVQKGSAAESYQLQKDDIIIGVNRKRVKNIAELRAIMEKSPNILALNIQRGER 449
             G+ V ++ + S A    L+  D+I+   + RV  I E    +E +        + G +
Sbjct: 429 DTGLVVADIDETSEAFDKGLRAGDLIVEAAQVRVTTIEEFEERVEAAK-------EAGRK 481

Query: 450 TLYLVVR 456
           ++ ++VR
Sbjct: 482 SILVLVR 488