Pairwise Alignments

Query, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

Subject, 530 a.a., DegP/HtrA-family serine protease from Caulobacter crescentus NA1000

 Score =  245 bits (626), Expect = 2e-69
 Identities = 171/460 (37%), Positives = 246/460 (53%), Gaps = 52/460 (11%)

Query: 25  ATAALPLSVNGEQIP-SLAPMLEKVTPAVVSIAVEG-TQVSRQRLPDQFRFFF------G 76
           +TA+ P        P S A + EKV+PAVV I V    Q    R+P    F         
Sbjct: 44  STASAPTFAPPPGAPMSFADIFEKVSPAVVQINVTSKAQAPSLRIPGLEGFDIVPRGQRR 103

Query: 77  PDFPTEQLQERPFRG----------LGSGVIINADKGYVVTNYHVINGAEKIRVKLYDGR 126
           P  P +Q Q++   G           GSG  I+AD GY+VTN HV+  A+ I+V L DGR
Sbjct: 104 PGQPGQQGQQQEDDGDTPATPKQQSAGSGFFISAD-GYIVTNNHVVADADDIQVVLKDGR 162

Query: 127 EFDAELVGGDEMSDVALLKL----NKAKNLTEIRIADSDKLRVGDFAVAIGNPFGLGQTV 182
           E  A LVG DE +D+A++K+     K K+ T +   +  K RVGD+ + IGNPFGLG T 
Sbjct: 163 ELKATLVGRDESTDLAVIKVVDPKAKGKDFTFVNFENQAKPRVGDWVITIGNPFGLGGTA 222

Query: 183 TSGIVSALGRSGLN--IENFENFIQTDAAINSGNSGGALVNLNGELIGINTAILGPNGGN 240
           T+GI+SA  R+ LN    +F  +IQ DA IN GNSGG   ++ G +IG+N+AI  P+GG+
Sbjct: 223 TAGIISAYDRN-LNDTTSSFVPYIQIDAPINRGNSGGPSFDIYGRVIGVNSAIYSPSGGS 281

Query: 241 VGIGFAIPSNMMKNLTDQILEFGEVKRGMLGVQGGEITSELADALGYESSKGAFVSQVVP 300
           VGIGFAIP+ + + +  Q++E G+V RG +GV      +E+A+ALG    KGA V+ VVP
Sbjct: 282 VGIGFAIPAEVAEGVAKQLIENGKVVRGYIGVSIMAFNAEMAEALGMSDVKGAIVASVVP 341

Query: 301 DSAADKAGIKAGDIITSLNGKKIDTFSELRAKVATLGAGKTITLGVLRDGKNQNIDVTLG 360
              A KAG+   DI+ ++NG KI   SEL  +V+    G+TI + ++RDGK + +DV  G
Sbjct: 342 GGPAAKAGLLPDDILVAVNGVKISDSSELTREVSKARPGETIKVSIIRDGKPRIVDVKSG 401

Query: 361 EQQNA-------------------------KTKAESLHQGLSGAELSNTTDSDP-IQGVK 394
            + +                          K  A  L  G   A    T   +P I+G+ 
Sbjct: 402 TRPSESSLAVTDDEQGQDGAAPTPDKPASQKVDALGLTLGPIDAASRQTYKIEPDIKGLL 461

Query: 395 VTEVQKGSAAESYQLQKDDIIIGVNRKRVKNIAELRAIME 434
           +  V+  S A    L K D++  +N   V ++A++ + +E
Sbjct: 462 IIGVKGDSDAGEKGLAKGDVLSNINGAPVTSVADVTSAVE 501



 Score = 31.6 bits (70), Expect = 7e-05
 Identities = 13/45 (28%), Positives = 27/45 (60%)

Query: 291 KGAFVSQVVPDSAADKAGIKAGDIITSLNGKKIDTFSELRAKVAT 335
           KG  +  V  DS A + G+  GD+++++NG  + + +++ + V T
Sbjct: 458 KGLLIIGVKGDSDAGEKGLAKGDVLSNINGAPVTSVADVTSAVET 502



 Score = 30.8 bits (68), Expect = 1e-04
 Identities = 16/58 (27%), Positives = 28/58 (48%)

Query: 379 AELSNTTDSDPIQGVKVTEVQKGSAAESYQLQKDDIIIGVNRKRVKNIAELRAIMEKS 436
           AE++       ++G  V  V  G  A    L  DDI++ VN  ++ + +EL   + K+
Sbjct: 320 AEMAEALGMSDVKGAIVASVVPGGPAAKAGLLPDDILVAVNGVKISDSSELTREVSKA 377