Pairwise Alignments

Query, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

Subject, 472 a.a., DegP/HtrA-family serine protease from Caulobacter crescentus NA1000

 Score =  243 bits (621), Expect = 7e-69
 Identities = 146/422 (34%), Positives = 246/422 (58%), Gaps = 23/422 (5%)

Query: 40  SLAPMLEKVTPAVVSIAVEGTQVSRQRLPDQFRFFFGPDFPTEQLQERPFRGLGSGVIIN 99
           S +P+++K  PAVV++A    ++ ++R+   + FF G      Q+Q      LGSG I+ 
Sbjct: 52  SFSPVVKKAAPAVVNVA--SRRLVQRRVDPFWDFFMGGGQGGSQVQS----SLGSGAIVR 105

Query: 100 ADKGYVVTNYHVINGAEKIRVKLYDGREFDAELVGGDEMSDVALLKLN-KAKNLTEIRIA 158
           AD G ++TN+H ING   I ++L D REF A ++  D  +D+A+LK++ K + L  + I 
Sbjct: 106 AD-GVIITNHHNINGMSDITIQLADRREFPAVVLLDDPRADLAVLKIDTKGEKLPVMAID 164

Query: 159 DSDKLRVGDFAVAIGNPFGLGQTVTSGIVSALGRSGLNIENFENFIQTDAAINSGNSGGA 218
           D ++L VGD  +A+GNPFG+GQTVT+GIVSAL R+ +   +F ++IQTDAAIN GNSGG 
Sbjct: 165 DQEQLEVGDLVLAMGNPFGVGQTVTNGIVSALARTDVGAADFGSYIQTDAAINPGNSGGP 224

Query: 219 LVNLNGELIGINTAILGPNGGNVGIGFAIPSNMMKNLTDQILEFG-EVKRGMLGVQGGEI 277
           LV+++G+L+GINT I+  +G + G+GFAIP+ +++ + +  L  G  + R  LGV+G  +
Sbjct: 225 LVDMDGDLVGINTFIISRSGSSSGVGFAIPARVVRQVVNAALGGGHSIVRPWLGVKGQAV 284

Query: 278 TSELADALGYESSKGAFVSQVVPDSAADKAGIKAGDIITSLNGKKIDTFSELRAKVATLG 337
           T ++A +LG  + +G  V+Q+ P S+A++AG+K GD+I S++G+ ++        + T  
Sbjct: 285 TGDIAKSLGMTAPRGVLVAQIYPGSSAERAGLKEGDVILSIDGQPVNDEGGGAFAIGTHK 344

Query: 338 AGKTITLGVLRDGKNQNIDVTLGEQQNAKTKAESLHQG---LSGAELSNTTDS------- 387
            G  + + + R  +   I V          + E    G    +GA + N + +       
Sbjct: 345 VGDRVPMQIRRGDRELTITVRADAAPETPARDERTLSGNNPFNGATVMNLSPAVAQDLGV 404

Query: 388 DPI--QGVKVTEVQKGSAAESYQLQKDDIIIGVNRKRVKNIAELRAIMEKSPNILALNIQ 445
           DP   +G  VT++  G A     ++  D +  VN +++  +A+L + +       ++ I+
Sbjct: 405 DPFAGRGALVTKIGPGYAGN--WMRPGDFVRSVNGRQINTVADLASAIAGRSGRWSVTIE 462

Query: 446 RG 447
           RG
Sbjct: 463 RG 464