Pairwise Alignments

Query, 352 a.a., outer membrane-stress sensor serine endopeptidase DegS from Vibrio cholerae E7946 ATCC 55056

Subject, 386 a.a., Outer membrane stress sensor protease DegS from Pseudomonas fluorescens FW300-N2E2

 Score =  249 bits (637), Expect = 6e-71
 Identities = 149/371 (40%), Positives = 214/371 (57%), Gaps = 28/371 (7%)

Query: 2   LKFWVRSISLGLLAAIAII------MVTPSLRAKLMPVVEQPRNIGALQISFNEAVRKAA 55
           L+F    +  G+L A+ II      +  PSL   L     Q + +    +S+ +AV  AA
Sbjct: 5   LRFSGWPLLAGVLVALLIIQRYPEWVGLPSLDVNLQQA-PQTKAVQQGPVSYADAVTTAA 63

Query: 56  PAVVNIYNRK------------------YSEND-RRKLSIQGLGSGVIVSEKGYIITNYH 96
           PAVVN+Y  K                  + +N  ++K     LGSGVI+S +GYI+TN H
Sbjct: 64  PAVVNLYTTKVINKPSHPLFEDPQFRRFFGDNSPKQKRMESSLGSGVIMSPEGYILTNNH 123

Query: 97  VVAQADQIVVALQDGRAAAAQLVGKDRRTDIAVLRVEGTGLPVIPLNPDYHPKVGDVVLA 156
           V + ADQIVVAL+DGR   A+++G D  TD+AVL+++   LP I +      ++GDV LA
Sbjct: 124 VTSGADQIVVALKDGRETLARVIGSDPETDLAVLKIDLKNLPAITIGRSDSIRIGDVTLA 183

Query: 157 IGNPYNLGQTTTFGIISATGRSSISADGRQAFIQTDAAINDGNSGGALVNTQGELVGINT 216
           IGNP+ +GQT T GIISATGR+ +  +  + FIQTDAAIN GNSGGALV+  G L GINT
Sbjct: 184 IGNPFGVGQTVTMGIISATGRNQLGLNNYEDFIQTDAAINPGNSGGALVDANGNLTGINT 243

Query: 217 ASFQQATDLETYGISFAIPYSLASKIMTKIIADGRVIRGYIGVDGQDINSMTSRLLGNEH 276
           A F ++    + GI FAIP  LA ++M  II  G+VIRG++G++ Q +    +   G   
Sbjct: 244 AIFSKSGG--SQGIGFAIPVKLAMEVMKSIIEHGQVIRGWLGIEVQPLTQELAESFGLSG 301

Query: 277 VGGIIILGVDPNGPAARAGFLEQDILLKIDGKKINGRQNVTDTVTDLRPGTVVDFTLLRK 336
             GI++ G+  +GPA +AG    D++L IDG+     +   + V  ++P   V   ++R 
Sbjct: 302 RPGIVVAGIFRDGPAQKAGLQLGDVILSIDGEPAGDGRRSMNQVARIKPTDKVTIQVMRN 361

Query: 337 GEEIVLPVTIG 347
           G+E+ L   IG
Sbjct: 362 GKELKLTAEIG 372