Pairwise Alignments

Query, 352 a.a., outer membrane-stress sensor serine endopeptidase DegS from Vibrio cholerae E7946 ATCC 55056

Subject, 386 a.a., Peptidase S1, chymotrypsin:PDZ/DHR/GLGF from Pseudomonas syringae pv. syringae B728a

 Score =  241 bits (616), Expect = 2e-68
 Identities = 146/371 (39%), Positives = 213/371 (57%), Gaps = 28/371 (7%)

Query: 2   LKFWVRSISLGLLAAIAII------MVTPSLRAKLMPVVEQPRNIGALQISFNEAVRKAA 55
           L+F+   +  G+L A+ II      +  PSL   L     Q  N+     S+ +AV  AA
Sbjct: 5   LRFFGWPLLAGVLIAMLIIQRYPQWVGLPSLDVNLQQA-PQTTNVMQGPSSYADAVIAAA 63

Query: 56  PAVVNIYNRK------------------YSEND-RRKLSIQGLGSGVIVSEKGYIITNYH 96
           PAVVN+Y  K                  + +N  ++K     LGSGV++S +GYI+TN H
Sbjct: 64  PAVVNLYTTKMVNKGNNPLFEDPQFRRFFGDNTPKQKRMESSLGSGVMMSPEGYILTNNH 123

Query: 97  VVAQADQIVVALQDGRAAAAQLVGKDRRTDIAVLRVEGTGLPVIPLNPDYHPKVGDVVLA 156
           V   ADQIVVAL+DGR   A+++G D  TD+AVL+++   LP I +      ++GDV LA
Sbjct: 124 VTTGADQIVVALKDGRETIARVIGNDPETDLAVLKIDLKNLPAITIARSDSIRIGDVALA 183

Query: 157 IGNPYNLGQTTTFGIISATGRSSISADGRQAFIQTDAAINDGNSGGALVNTQGELVGINT 216
           IGNP+ +GQT T GIISATGR+ +  +  + FIQTDAAIN GNSGGALV+  G L+GINT
Sbjct: 184 IGNPFGVGQTVTMGIISATGRNQLGLNTYEDFIQTDAAINPGNSGGALVDASGNLIGINT 243

Query: 217 ASFQQATDLETYGISFAIPYSLASKIMTKIIADGRVIRGYIGVDGQDINSMTSRLLGNEH 276
           A F ++    + GI FAIP  LA  +M  II  G+VIRG++G++ Q +    +   G + 
Sbjct: 244 AIFSKSGG--SQGIGFAIPTKLAMDVMKSIIEHGQVIRGWLGIEVQPLTQELAESFGLKD 301

Query: 277 VGGIIILGVDPNGPAARAGFLEQDILLKIDGKKINGRQNVTDTVTDLRPGTVVDFTLLRK 336
             GI++ G+  +GPA +AG    D++L I+G+     +   + V   +P   +   ++R 
Sbjct: 302 RPGIVVAGIFRDGPAQKAGLQLGDVILSINGEPAGDGRRSMNQVARTKPKDKIAIDVMRN 361

Query: 337 GEEIVLPVTIG 347
           G+E+ L   +G
Sbjct: 362 GKEMRLSAEVG 372