Pairwise Alignments

Query, 352 a.a., outer membrane-stress sensor serine endopeptidase DegS from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., protease DegS (RefSeq) from Shewanella amazonensis SB2B

 Score =  319 bits (818), Expect = 6e-92
 Identities = 164/314 (52%), Positives = 230/314 (73%), Gaps = 6/314 (1%)

Query: 38  RNIGALQISFNEAVRKAAPAVVNIYNRKYSENDRRKLS---IQGLGSGVIVSEKGYIITN 94
           R  G  ++SF +AVR+AAPAV NIYN   S + R+ L+   +QGLGSGVI+S++GYI+TN
Sbjct: 40  RGNGGSELSFAKAVRRAAPAVANIYN--ISIDQRQPLNSGALQGLGSGVIISKEGYILTN 97

Query: 95  YHVVAQADQIVVALQDGRAAAAQLVGKDRRTDIAVLRVEGTGLPVIPLNPDYHPKVGDVV 154
           YHV+ +AD+IV+ALQDGR  +A++VG D  TD++VL++EG  LPV+PLN    P+VGDVV
Sbjct: 98  YHVIKKADEIVIALQDGRRFSAEVVGSDPETDLSVLKIEGDKLPVVPLNLTTPPQVGDVV 157

Query: 155 LAIGNPYNLGQTTTFGIISATGRSSISADGRQAFIQTDAAINDGNSGGALVNTQGELVGI 214
           LAIGNPYNLGQT T GIISATGR+ +S+ G Q F+QTDAAIN GNSGGAL++T G+++GI
Sbjct: 158 LAIGNPYNLGQTITQGIISATGRNGLSS-GYQDFLQTDAAINAGNSGGALIDTNGDVIGI 216

Query: 215 NTASFQQATDLETYGISFAIPYSLASKIMTKIIADGRVIRGYIGVDGQDINSMTSRLLGN 274
           NTA++Q   +   +GISFAIP  LA  IM K+I  GRVIRG +G+ G+ +    +++L  
Sbjct: 217 NTAAYQIGDEGGGHGISFAIPIRLAYSIMGKLIEHGRVIRGALGISGEALTPFMAQVLKM 276

Query: 275 EHVGGIIILGVDPNGPAARAGFLEQDILLKIDGKKINGRQNVTDTVTDLRPGTVVDFTLL 334
           + V G+++ GVD NGPAA A    +D++++  G+ +   + + D + + +PGT V  T++
Sbjct: 277 QEVRGVLVTGVDRNGPAADAQMQPRDVIIEYGGESVVSAEMLMDRIAETKPGTEVQMTII 336

Query: 335 RKGEEIVLPVTIGE 348
           R+G+   LPV IGE
Sbjct: 337 RQGKAYTLPVIIGE 350