Pairwise Alignments

Query, 352 a.a., outer membrane-stress sensor serine endopeptidase DegS from Vibrio cholerae E7946 ATCC 55056

Subject, 508 a.a., Peptidase S1C, Do (NCBI) from Rhodospirillum rubrum S1H

 Score =  197 bits (502), Expect = 4e-55
 Identities = 116/271 (42%), Positives = 158/271 (58%), Gaps = 4/271 (1%)

Query: 79  LGSGVIVSEKGYIITNYHVVAQADQIVVALQDGRAAAAQLVGKDRRTDIAVLRVE-GTGL 137
           LGSG IV   GYI+TN HV+  AD+I V L D  A  A+LVGKD +TD+A+LR++    L
Sbjct: 115 LGSGFIVDAAGYIVTNNHVIQDADEITVILHDDTAIKAELVGKDEKTDVALLRIKTDKPL 174

Query: 138 PVIPLNPDYHPKVGDVVLAIGNPYNLGQTTTFGIISATGRSSISADGRQAFIQTDAAIND 197
             +P       +VGD V+AIGNP+ LG T T GIISA  R  I+A    +FIQTDAAIN 
Sbjct: 175 TAVPWGNSEAARVGDWVMAIGNPFGLGGTVTAGIISAKTR-DINAGPYDSFIQTDAAINK 233

Query: 198 GNSGGALVNTQGELVGINTASFQQATDLETYGISFAIPYSLASKIMTKIIADGRVIRGYI 257
           GNSGG L N  GE++GINTA F  +    + GI F++P +LA +++  I   GR  RG+I
Sbjct: 234 GNSGGPLFNMHGEVIGINTAIFSPSGG--SIGIGFSVPSNLAHQVIDDIKKFGRTRRGWI 291

Query: 258 GVDGQDINSMTSRLLGNEHVGGIIILGVDPNGPAARAGFLEQDILLKIDGKKINGRQNVT 317
           GV  Q +    +  LG E   G +I  V P GPAA AG    D+++  DG+ +   + + 
Sbjct: 292 GVRIQSVTDEIAEGLGLEKSAGALIAAVTPGGPAAAAGLKVGDVIVSFDGRPVPDMRTLP 351

Query: 318 DTVTDLRPGTVVDFTLLRKGEEIVLPVTIGE 348
             V +   G      + R+G+   L + +GE
Sbjct: 352 RIVAETEIGKDAAIGVWREGKRQDLKMKVGE 382