Pairwise Alignments

Query, 352 a.a., outer membrane-stress sensor serine endopeptidase DegS from Vibrio cholerae E7946 ATCC 55056

Subject, 523 a.a., Do family serine endopeptidase from Rhodopseudomonas palustris CGA009

 Score =  195 bits (496), Expect = 2e-54
 Identities = 108/274 (39%), Positives = 160/274 (58%), Gaps = 5/274 (1%)

Query: 76  IQGLGSGVIVSEKGYIITNYHVVAQADQIVVALQDGRAAAAQLVGKDRRTDIAVLRVEG- 134
           I G GSG  +S  GY +TN HVV  AD++ V   DG+   A+++G D RTD+A+++VEG 
Sbjct: 137 ITGQGSGFFISADGYAVTNNHVVEGADKVEVTTDDGKTYKAKVIGNDPRTDLALIKVEGG 196

Query: 135 TGLPVIPLNPDYHPKVGDVVLAIGNPYNLGQTTTFGIISATGRSSISADGRQAFIQTDAA 194
           +  P   L+ +  P++GD VLA+GNP+ LG T T GI+SA GR  I       FIQ DA 
Sbjct: 197 SSFPYAKLS-EGKPRIGDWVLAVGNPFGLGGTVTAGIVSAMGRD-IGNGPYDDFIQIDAP 254

Query: 195 INDGNSGGALVNTQGELVGINTASFQQATDLETYGISFAIPYSLASKIMTKIIADGRVIR 254
           +N GNSGG   NT GE+VG+NTA +  +    + GI+F+IP +    ++ ++   G V R
Sbjct: 255 VNKGNSGGPAFNTAGEVVGVNTAIYSPSGG--SIGIAFSIPANTVKAVVEQLKDRGSVSR 312

Query: 255 GYIGVDGQDINSMTSRLLGNEHVGGIIILGVDPNGPAARAGFLEQDILLKIDGKKINGRQ 314
           G+IGV  Q +    +  LG +   G ++     NGPAA+AG    D+++ +DG  +   +
Sbjct: 313 GWIGVQVQPVTPEIADSLGLKKAEGALVAEPQSNGPAAKAGIESGDVIVAVDGTSVKDAR 372

Query: 315 NVTDTVTDLRPGTVVDFTLLRKGEEIVLPVTIGE 348
            +  T+    PG  V  T+  KG+E  L +T+GE
Sbjct: 373 ELARTIGAFAPGHAVKLTVFHKGKERELTLTLGE 406



 Score = 40.4 bits (93), Expect = 1e-07
 Identities = 16/42 (38%), Positives = 27/42 (64%)

Query: 279 GIIILGVDPNGPAARAGFLEQDILLKIDGKKINGRQNVTDTV 320
           G+++  VDP G AA  GF E D++L++ GK ++   +V D +
Sbjct: 451 GVVVTDVDPKGAAADRGFKEGDVILEVAGKNVSSPADVRDVL 492