Pairwise Alignments

Query, 352 a.a., outer membrane-stress sensor serine endopeptidase DegS from Vibrio cholerae E7946 ATCC 55056

Subject, 497 a.a., periplasmic serine protease, Do/DeqQ family from Dechlorosoma suillum PS

 Score =  189 bits (480), Expect = 1e-52
 Identities = 104/264 (39%), Positives = 157/264 (59%), Gaps = 3/264 (1%)

Query: 77  QGLGSGVIVSEKGYIITNYHVVAQADQIVVALQDGRAAAAQLVGKDRRTDIAVLRVEGTG 136
           +G+GSG IVS  GY++TN HVVA AD++ V L D R   A++VG DRR+D+A++++  + 
Sbjct: 127 RGIGSGFIVSADGYVLTNAHVVADADEVAVKLTDKREFKAKVVGIDRRSDVALIKIAASN 186

Query: 137 LPVIPLNPDYHPKVGDVVLAIGNPYNLGQTTTFGIISATGRSSISADGRQAFIQTDAAIN 196
           LP + +      KVG+ V AIG P+    + T GI+SA  R ++  +    FIQTD AIN
Sbjct: 187 LPTVRIGSPDRLKVGEWVAAIGAPFGFENSVTAGIVSAKSR-ALPDETYVPFIQTDVAIN 245

Query: 197 DGNSGGALVNTQGELVGINTASFQQATDLETYGISFAIPYSLASKIMTKIIADGRVIRGY 256
            GNSGG L N +GE+VGIN+  + ++   +  GISFAIP  +A K+  ++   G+V RG 
Sbjct: 246 PGNSGGPLFNLKGEVVGINSQIYSRSGGYQ--GISFAIPIDVAMKVKDQLQKTGKVQRGR 303

Query: 257 IGVDGQDINSMTSRLLGNEHVGGIIILGVDPNGPAARAGFLEQDILLKIDGKKINGRQNV 316
           +GV  Q +    +   G     G ++ GVD + PA +AG    D+++ +DG  I    ++
Sbjct: 304 LGVTMQPVTKELAESFGLAKPVGALVTGVDRSSPADKAGLQPGDVIIALDGVPIEEATDL 363

Query: 317 TDTVTDLRPGTVVDFTLLRKGEEI 340
              V D  PGT +  T+LR G+ +
Sbjct: 364 PRKVGDSAPGTKLGLTVLRDGKRL 387



 Score = 38.5 bits (88), Expect = 4e-07
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 14/125 (11%)

Query: 225 LETYGISFAIPYSLASKIMTKIIADGRVIRGYIGVDGQDINSMTSRLLGNEHVGGIIILG 284
           LE   +  A+P   A +   +    GRV     G+  + ++   +  LG+    G++++G
Sbjct: 387 LEKQAVLAAMPSETAPQARGESAGGGRV-----GLAVRSLSREEAAALGSS---GVVVVG 438

Query: 285 VDPNGPAARAGFLEQDILLKIDGKKINGRQNVTDTVTDLRPGTVVDFTLLRKGEEIVLPV 344
           V  NGPAARAG  E D++L ++    N R +    + +L       F LL + E+  L V
Sbjct: 439 V--NGPAARAGLQEGDVVLAVN----NARVSSPAQLKELLDQAGKRFALLIQREDARLYV 492

Query: 345 TIGED 349
            +  D
Sbjct: 493 PVRTD 497