Pairwise Alignments

Query, 352 a.a., outer membrane-stress sensor serine endopeptidase DegS from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., serine endoprotease DegQ from Klebsiella michiganensis M5al

 Score =  199 bits (507), Expect = 1e-55
 Identities = 114/276 (41%), Positives = 169/276 (61%), Gaps = 4/276 (1%)

Query: 79  LGSGVIV-SEKGYIITNYHVVAQADQIVVALQDGRAAAAQLVGKDRRTDIAVLRVEGT-G 136
           LGSGVI+ + KGY++TN HVV  A  I V L DGR   A++VGKD R+DIA+++++    
Sbjct: 118 LGSGVIIDAAKGYVVTNNHVVDNATTIKVQLSDGRKFDAKVVGKDPRSDIALIQIQDPKN 177

Query: 137 LPVIPLNPDYHPKVGDVVLAIGNPYNLGQTTTFGIISATGRSSISADGRQAFIQTDAAIN 196
           L  I L      +VGD  +AIGNP+ LG+T T GI+SA GRS ++ +  + FIQTDAAIN
Sbjct: 178 LSAIKLADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNVENYENFIQTDAAIN 237

Query: 197 DGNSGGALVNTQGELVGINTASFQQATDLETYGISFAIPYSLASKIMTKIIADGRVIRGY 256
            GNSGGALVN  GEL+GINTA    A D    GI FAIP ++   +  +++  G+V RG 
Sbjct: 238 RGNSGGALVNLNGELIGINTAIL--APDGGNIGIGFAIPSNMVKNLTDQMVKFGQVKRGE 295

Query: 257 IGVDGQDINSMTSRLLGNEHVGGIIILGVDPNGPAARAGFLEQDILLKIDGKKINGRQNV 316
           +G+ G ++NS  ++ +  +   G  +  V PN  AA+AG    D++  ++GK I+    +
Sbjct: 296 LGIMGTELNSELAKAMKVDAQRGAFVSQVMPNSAAAKAGIKAGDVITTLNGKSISSFAAL 355

Query: 317 TDTVTDLRPGTVVDFTLLRKGEEIVLPVTIGEDTRD 352
              V  +  G+ V+  LLR G+ + + V + +  ++
Sbjct: 356 RAQVGTMSIGSKVELGLLRDGKPVTVTVELQQSNQN 391



 Score = 30.4 bits (67), Expect = 1e-04
 Identities = 66/323 (20%), Positives = 118/323 (36%), Gaps = 73/323 (22%)

Query: 34  VEQPRNIGALQISFNEAVRKA--APAVVNIYNRKYSENDRRKLSIQGLG----SGVI--V 85
           ++ P+N+ A++++ ++A+R      A+ N +               GLG    SG++  +
Sbjct: 172 IQDPKNLSAIKLADSDALRVGDYTVAIGNPF---------------GLGETVTSGIVSAL 216

Query: 86  SEKGYIITNYHVVAQADQIVVALQDGRAAAAQLVGKDRRTDIAVLRVEGTGLPVIPLNPD 145
              G  + NY    Q D    A+  G +  A          +  L  E  G+    L PD
Sbjct: 217 GRSGLNVENYENFIQTD---AAINRGNSGGA----------LVNLNGELIGINTAILAPD 263

Query: 146 YHPKVGDVVLAIGNPYNLGQTTTFGIIS--ATGRSSISADGRQAFIQTDAAINDGNSGGA 203
                G++ +    P N+ +  T  ++      R  +   G +   +   A+      GA
Sbjct: 264 G----GNIGIGFAIPSNMVKNLTDQMVKFGQVKRGELGIMGTELNSELAKAMKVDAQRGA 319

Query: 204 LV-----NTQGELVGINTASFQQATDLETYGIS-FAI------PYSLASKIMTKIIADGR 251
            V     N+     GI        T L    IS FA         S+ SK+   ++ DG+
Sbjct: 320 FVSQVMPNSAAAKAGIKAGDV--ITTLNGKSISSFAALRAQVGTMSIGSKVELGLLRDGK 377

Query: 252 VIRGYIGVDGQDINSMTSRLLGNEHVG----------GIIILGVDPNGPAARAGFLEQDI 301
            +   + +   + N + S  + N   G          G+++  V    PAA+ G  + DI
Sbjct: 378 PVTVTVELQQSNQNQVDSSTIFNGIEGAEMSNKGQDKGVVVSNVKAGTPAAQIGLKKGDI 437

Query: 302 LLKIDGKKINGRQNVTDTVTDLR 324
           +       +   Q     + DLR
Sbjct: 438 I-------VGANQQPVKNIADLR 453