Pairwise Alignments

Query, 352 a.a., outer membrane-stress sensor serine endopeptidase DegS from Vibrio cholerae E7946 ATCC 55056

Subject, 530 a.a., DegP/HtrA-family serine protease from Caulobacter crescentus NA1000

 Score =  201 bits (511), Expect = 4e-56
 Identities = 113/277 (40%), Positives = 161/277 (58%), Gaps = 8/277 (2%)

Query: 77  QGLGSGVIVSEKGYIITNYHVVAQADQIVVALQDGRAAAAQLVGKDRRTDIAVLRV---- 132
           Q  GSG  +S  GYI+TN HVVA AD I V L+DGR   A LVG+D  TD+AV++V    
Sbjct: 127 QSAGSGFFISADGYIVTNNHVVADADDIQVVLKDGRELKATLVGRDESTDLAVIKVVDPK 186

Query: 133 -EGTGLPVIPLNPDYHPKVGDVVLAIGNPYNLGQTTTFGIISATGRS-SISADGRQAFIQ 190
            +G     +       P+VGD V+ IGNP+ LG T T GIISA  R+ + +      +IQ
Sbjct: 187 AKGKDFTFVNFENQAKPRVGDWVITIGNPFGLGGTATAGIISAYDRNLNDTTSSFVPYIQ 246

Query: 191 TDAAINDGNSGGALVNTQGELVGINTASFQQATDLETYGISFAIPYSLASKIMTKIIADG 250
            DA IN GNSGG   +  G ++G+N+A +  +    + GI FAIP  +A  +  ++I +G
Sbjct: 247 IDAPINRGNSGGPSFDIYGRVIGVNSAIYSPSGG--SVGIGFAIPAEVAEGVAKQLIENG 304

Query: 251 RVIRGYIGVDGQDINSMTSRLLGNEHVGGIIILGVDPNGPAARAGFLEQDILLKIDGKKI 310
           +V+RGYIGV     N+  +  LG   V G I+  V P GPAA+AG L  DIL+ ++G KI
Sbjct: 305 KVVRGYIGVSIMAFNAEMAEALGMSDVKGAIVASVVPGGPAAKAGLLPDDILVAVNGVKI 364

Query: 311 NGRQNVTDTVTDLRPGTVVDFTLLRKGEEIVLPVTIG 347
           +    +T  V+  RPG  +  +++R G+  ++ V  G
Sbjct: 365 SDSSELTREVSKARPGETIKVSIIRDGKPRIVDVKSG 401



 Score = 30.8 bits (68), Expect = 9e-05
 Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 277 VGGIIILGVDPNGPAARAGFLEQDILLKIDGKKINGRQNVTDTVTDLRPG--TVVDFTLL 334
           + G++I+GV  +  A   G  + D+L  I+G  +    +VT  V   +      V   ++
Sbjct: 457 IKGLLIIGVKGDSDAGEKGLAKGDVLSNINGAPVTSVADVTSAVETAKKAGRASVLVKIV 516

Query: 335 RKGEEIVLPVTI 346
           R+   + +P+ I
Sbjct: 517 RQNRPVFIPLKI 528