Pairwise Alignments

Query, 184 a.a., ribosome maturation factor RimM from Vibrio cholerae E7946 ATCC 55056

Subject, 178 a.a., 16S rRNA processing protein RimM from Pseudomonas fluorescens FW300-N2E2

 Score =  130 bits (326), Expect = 2e-35
 Identities = 67/177 (37%), Positives = 112/177 (63%), Gaps = 2/177 (1%)

Query: 8   TMSKQNEKLVVGKLGSSYGIRGWLKVFSYTDNPESIFDYSPWYIDQKGEWVEYKVEGWKR 67
           T    ++ +VVGK+ S +G+RG +KV+S+TD  +++ DY  W + ++G   + ++   + 
Sbjct: 4   TPKDADDLIVVGKIYSVHGVRGEVKVYSFTDPIKNLLDYKTWTLKREGSVKQVELVSGRG 63

Query: 68  HNKGWVVKLQGLDVREDAHLLTNFEIAIDPASLPELSEDEFYWRELFGMQVVTTNGYDLG 127
           ++K  V KL+GLD RE+A LL  +EI +     PEL++ E+YW +L G++V+   G  LG
Sbjct: 64  NDKFLVAKLKGLDDREEARLLAGYEICVPRNLFPELTDGEYYWYQLVGLKVIDHLGQLLG 123

Query: 128 VVTDMMETGSNDVLVVKANLKDAFGQKERLIPFLEEQVIKVVDRQAQRIEVDWDPAF 184
            +  ++ETGSNDV+VVK  +  +   +ERL+P+  EQ +  VD  A  ++V+WD  F
Sbjct: 124 KIDHLLETGSNDVMVVKPCV-GSLDDRERLLPY-TEQCVLAVDLAAGEMKVEWDADF 178