Pairwise Alignments

Query, 184 a.a., ribosome maturation factor RimM from Vibrio cholerae E7946 ATCC 55056

Subject, 179 a.a., 16S rRNA processing protein RimM from Pseudomonas syringae pv. syringae B728a

 Score =  125 bits (315), Expect = 3e-34
 Identities = 68/179 (37%), Positives = 112/179 (62%), Gaps = 5/179 (2%)

Query: 8   TMSKQNEKLVVGKLGSSYGIRGWLKVFSYTDNPESIFDYSPWYIDQKGEWVEYKVE--GW 65
           T +  ++ +V+GK+ S +G+RG +KV+S+TD   ++ DY  W + ++G  V+ +VE    
Sbjct: 4   TPASADDLIVIGKIYSVHGVRGEVKVYSFTDPIGNLLDYKTWTLRREGS-VDKQVELVSG 62

Query: 66  KRHNKGWVVKLQGLDVREDAHLLTNFEIAIDPASLPELSEDEFYWRELFGMQVVTTNGYD 125
           +  +K  V KL+GLD RE+A LL+ +EI +     P+L + E+YW +L G++V+   G  
Sbjct: 63  RLQSKFLVTKLKGLDDREEARLLSGYEICVPRNLFPDLDDGEYYWYQLEGLKVIDQLGQL 122

Query: 126 LGVVTDMMETGSNDVLVVKANLKDAFGQKERLIPFLEEQVIKVVDRQAQRIEVDWDPAF 184
           LG +  ++ETGSNDV+VVK     +   +ERL+P+  EQ +  +D  A  ++VDWD  F
Sbjct: 123 LGKIDHLLETGSNDVMVVKP-CAGSLDDRERLLPY-TEQCVLAIDMAAGEMKVDWDADF 179