Pairwise Alignments

Query, 184 a.a., ribosome maturation factor RimM from Vibrio cholerae E7946 ATCC 55056

Subject, 182 a.a., 16S rRNA-processing protein from Synechococcus elongatus PCC 7942

 Score = 65.1 bits (157), Expect = 7e-16
 Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 12/182 (6%)

Query: 6   KETMSKQNEKLVVGKLGSSYGIRGWLKVFSYTDNPESIFDYSPWYIDQKGEWVEYKVE-- 63
           + T + +   L +G++ +  G+RG ++V   +D PE      P ++ +  +     VE  
Sbjct: 3   ESTTTIETAWLAIGQIVAPQGLRGEMRVNPSSDFPERFLIPGPRWLRRPRQTEPEVVELE 62

Query: 64  -GWKRHNKG-WVVKLQGLDVREDAHLLTNFEIAIDPASLPELSEDEFYWRELFGMQVV-T 120
            G     K  ++V+L G+  RE A  L   E+ +  +  PEL E EF+  +L  + V+  
Sbjct: 63  RGRAIAGKNLYIVQLAGITSREQAEALRGCELLVPASDRPELDEGEFHVLDLIDLSVIDQ 122

Query: 121 TNGYDLGVVTDMMETGSNDVLVVKANLKDAFGQKERLIPFLEEQVIKVVDRQAQRIEVDW 180
            +   LG+V D++  G ND+LVV+  L D    +E  IPF+ E ++ VVD    RIE+  
Sbjct: 123 ASSTPLGIVRDVVSAG-NDLLVVE--LTDG---REVYIPFV-EAIVPVVDLAQGRIEITP 175

Query: 181 DP 182
            P
Sbjct: 176 PP 177