Pairwise Alignments

Query, 184 a.a., ribosome maturation factor RimM from Vibrio cholerae E7946 ATCC 55056

Subject, 187 a.a., 16S rRNA-processing protein RimM from Sinorhizobium meliloti 1021

 Score = 76.3 bits (186), Expect = 3e-19
 Identities = 49/173 (28%), Positives = 96/173 (55%), Gaps = 11/173 (6%)

Query: 9   MSKQNEKLVVGKLGSSYGIRGWLKVFSYTDNPESIFDYSPWYIDQKGEWVEYKVEGWKRH 68
           M++    +++  +G++ G+RG ++V S+TD+P ++ DY   + +   +   ++V   +  
Sbjct: 1   MTQLKNPVLMATIGAAQGLRGEVRVKSFTDDPAALGDYGNLHSE---DGRVFEVLEIREA 57

Query: 69  NKGWVVKLQGLDVREDAHLLTNFEIAIDPASLPE--LSEDEFYWRELFGMQVVTTNGYDL 126
               VV+ +G++ R  A  L   E+ I+  +LP+  L EDEF++ +L G++ V   G   
Sbjct: 58  KNVVVVRFRGINDRTAAEALNGLELFIERDNLPDDDLDEDEFFYADLEGLEAVDRTGKSY 117

Query: 127 GVVTDMMETGSNDVLVVKANLKDAFGQKERLIPFLEEQVIKVVDRQAQRIEVD 179
           G VT + + G+ D+L +K       G +  LIPF E  V++ +D +A ++ +D
Sbjct: 118 GSVTGVFDFGAGDLLELKGP-----GLRPVLIPFTEWSVLE-IDLEAGKLVID 164