Pairwise Alignments

Query, 184 a.a., ribosome maturation factor RimM from Vibrio cholerae E7946 ATCC 55056

Subject, 167 a.a., putative 16S rRNA-processing protein RimM from Phaeobacter inhibens DSM 17395

 Score = 75.1 bits (183), Expect = 6e-19
 Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 7/166 (4%)

Query: 14  EKLVVGKLGSSYGIRGWLKVFSYTDNPESIFDYSPWYIDQKGEWVEYKVEGWKRHNKGWV 73
           E++ VG +  SYG+RG +++ S+   PE I DYSP   +   +   Y +   +    G+ 
Sbjct: 3   EQICVGAISGSYGVRGEVRLKSFCAMPEDIEDYSPLSTEDGSQ--TYTITLVRAIKNGFT 60

Query: 74  VKLQGLDVREDAHLLTNFEIAIDPASLPELSEDEFYWRELFGMQVVTTNGYDLGVVTDMM 133
            ++ G++ +E A  L    +      LP L +DE+Y  +L G++V  T G  LG V  + 
Sbjct: 61  ARIGGIETKEQADALKGVRLFAPRERLPNLPDDEYYHTDLMGLEVYDTGGTLLGSVKSVQ 120

Query: 134 ETGSNDVLVVKANLKDAFGQKERLIPFLEEQVIKVVDRQAQRIEVD 179
             G++D+L +    +     K  L+PF     +  VD  + RI  D
Sbjct: 121 NHGASDLLEIAIPAE----SKTVLLPF-TLAAVPTVDLASGRIIAD 161