Pairwise Alignments

Query, 184 a.a., ribosome maturation factor RimM from Vibrio cholerae E7946 ATCC 55056

Subject, 182 a.a., 16S rRNA processing protein RimM from Dechlorosoma suillum PS

 Score =  110 bits (274), Expect = 2e-29
 Identities = 62/184 (33%), Positives = 100/184 (54%), Gaps = 16/184 (8%)

Query: 8   TMSKQNEKLVVGKLGSSYGIRGWLKVFSYTDNPESIFDYSPWYI-DQKGE---------W 57
           T +  N  +V+GK+   YGI+GW+++  + D+P +      W++  +KG+         W
Sbjct: 2   TATDTNPVIVLGKITVPYGIQGWVRIHPFADDPLAWAKMPEWWVATEKGDGAAEVPLAQW 61

Query: 58  VEYKVEGWKRHNKGWVVKLQGLDVREDAHLLTNFEIAIDPASLPELSEDEFYWRELFGMQ 117
              K++  + H  G V +L+G+D R  A  L  F +     ++P  SE+EFYW +L G+ 
Sbjct: 62  RSCKLKQCRWHGDGLVARLEGVDDRNAAEALQGFLVGAPREAMPATSENEFYWTDLIGLD 121

Query: 118 VVTTNGYDLGVVTDMMETGSNDVLVVKANLKDAFGQKERLIPFLEEQVIKVVDRQAQRIE 177
           VV T    LG V  ++ETG+NDVL V A        +ERL+PF+   V+  V++   RI 
Sbjct: 122 VVNTRDEKLGQVVGLIETGANDVLRVAAE-----DGEERLLPFV-AAVVLAVEQADHRIR 175

Query: 178 VDWD 181
           V+W+
Sbjct: 176 VEWE 179