Pairwise Alignments

Query, 184 a.a., ribosome maturation factor RimM from Vibrio cholerae E7946 ATCC 55056

Subject, 210 a.a., 16S rRNA processing protein RimM (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 59.3 bits (142), Expect = 4e-14
 Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 8/166 (4%)

Query: 18  VGKLGSSYGIRGWLKVFSYTDNPESIFDYSPWYIDQKGEWVEYKVEGWKRHNKGWVVKLQ 77
           +G +G  +G+RG + V  + ++P+ +   + W    +G    + V   +RH    +V  +
Sbjct: 9   IGLVGRPHGLRGEVGVDFWAESPD-LLRGTLWLRPGRGAPRPHTVAAVRRHQGRPLVLFE 67

Query: 78  GLDVREDAHLLTNFEIAIDPASLPELSEDEFYWRELFGMQVVT-TNGYDLGVVTDMMETG 136
           G+  R  A  L    + +    LPE +EDE Y  EL G++V+    G  LG + D+   G
Sbjct: 68  GIADRSAAETLRGMHVLVPKDRLPEPAEDEVYLHELLGLRVLLHDTGAALGTLDDVQMPG 127

Query: 137 SNDVLVVKANLKDAFGQKERLIPFLEEQVIKVVDRQAQRIEVDWDP 182
             +V     +++ A G KE L+P +EE V   +D  A+ + +   P
Sbjct: 128 GQEVW----SIRTADG-KEVLLPAVEEFVAS-IDLDAREVRITPPP 167