Pairwise Alignments

Query, 184 a.a., ribosome maturation factor RimM from Vibrio cholerae E7946 ATCC 55056

Subject, 176 a.a., 16S rRNA processing protein RimM (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 47.0 bits (110), Expect = 2e-10
 Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 2/128 (1%)

Query: 18  VGKLGSSYGIRGWLKVFSYTDNPESIFDYSPWYIDQKGEWVEYKVEGWKRHNKGWVVKLQ 77
           +G L   +G++G + V  Y D+P  + + + +    +      KV+  + H    +V  +
Sbjct: 9   IGLLTRPHGLKGEVCVDYYADSP-FLLEGTVYLKAGRAAPRPVKVQSMRMHKGRPLVIFE 67

Query: 78  GLDVREDAHLLTNFEIAIDPASLPELSEDEFYWRELFGMQVV-TTNGYDLGVVTDMMETG 136
           G++ R  A LL    + +   +LPEL EDE Y  EL G+ VV   +G  LGV+  +    
Sbjct: 68  GVNDRTAAELLRGHVMLVPEDTLPELDEDEVYLFELEGISVVIDESGEHLGVIERIDTDA 127

Query: 137 SNDVLVVK 144
             ++ V++
Sbjct: 128 YQEIWVIR 135