Pairwise Alignments

Query, 461 a.a., signal recognition particle protein from Vibrio cholerae E7946 ATCC 55056

Subject, 477 a.a., Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  146 bits (368), Expect = 2e-39
 Identities = 103/299 (34%), Positives = 156/299 (52%), Gaps = 18/299 (6%)

Query: 2   FENLTDRLSKTLKNISGKGR----LTEDNIKDTLRE-VRMALLEADVALPVVRDFVNRVK 56
           F  L   LSKT  +I G+G     L +  I D L E +   LL ADV +      +  + 
Sbjct: 172 FARLKQGLSKTSASI-GEGMASLFLGKKVIDDELLEDIETRLLTADVGVEATSVIIQSLT 230

Query: 57  EGAVGVEVSKSLTPGQEFIKIVRQQLEAVMGESNEALNLAAQ-PPAVILMAGLQGAGKTT 115
           +        K LT      K ++ +L +++    + L +A+Q  P VIL+ G+ GAGKTT
Sbjct: 231 QKVA----RKQLTDADALYKSLQGELTSLLKPVEKPLVIASQNKPFVILVVGVNGAGKTT 286

Query: 116 SVGKLSKLLKERDKKKVLVVSADVYRPAAIKQLETLANDLGVDFFPSTPDQKPIDIANAA 175
           ++GKL+K L + + KKV++ + D +R AA++QL+       +             +   A
Sbjct: 287 TIGKLAKKL-QLEGKKVMLAAGDTFRAAAVEQLQVWGERNKIPVIAQHTGADSASVIFDA 345

Query: 176 IDHAKKKFYDVLIVDTAGRLAIDEQMMAEIQALHKAIN------PVETLFVVDAMTGQDA 229
           +  AK +  DVLI DTAGRL   + +M E++ + + I       P E L V+DA TGQ+A
Sbjct: 346 VQAAKARGIDVLIADTAGRLHTKDNLMEELKKVRRVIGKLDADAPHEVLLVLDAGTGQNA 405

Query: 230 ADTAKAFGDALPLTGVILTKVDGDARGGAALSVRHITGKPIKFIGVGEKTDALEPFHPD 288
            + AK F   + LTG+ LTK+DG A+GG   ++    G PI++IGVGE  D L  F  +
Sbjct: 406 INQAKQFNQTVELTGLALTKLDGTAKGGVIFALAKQFGLPIRYIGVGEGIDDLRTFEAE 464