Pairwise Alignments

Query, 461 a.a., signal recognition particle protein from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., signal recognition particle-docking protein FtsY from Pseudomonas stutzeri RCH2

 Score =  138 bits (348), Expect = 3e-37
 Identities = 96/306 (31%), Positives = 154/306 (50%), Gaps = 32/306 (10%)

Query: 2   FENLTDRLSKTLKNIS--------GKGRLTEDNIKDTLREVRMALLEADVALP----VVR 49
           F  L   LSKT  +I         GK  + +D     L E+   LL ADV +     +++
Sbjct: 121 FARLKQGLSKTSSSIGEGMASLFLGKKAIDDD----LLDELETRLLTADVGVEATTAIMQ 176

Query: 50  DFVNRVKEGAVGVEVSKSLTPGQEFIKIVRQQLEAVMGESNEALNL-AAQPPAVILMAGL 108
           +   RV          K L         ++++L  ++    + L + + + P VIL+ G+
Sbjct: 177 NLTRRVSR--------KELADSGALYTALQEELAGLLKPVEQPLVVDSGKRPYVILVVGV 228

Query: 109 QGAGKTTSVGKLSKLLKERDKKKVLVVSADVYRPAAIKQLETLANDLGVDFFPSTPDQKP 168
            G GKTT++GKL+K L + + KKV++ + D +R AA++QL+       +           
Sbjct: 229 NGVGKTTTIGKLAKKL-QLEGKKVMLAAGDTFRAAAVEQLQVWGERNSIPVIAQHTGADS 287

Query: 169 IDIANAAIDHAKKKFYDVLIVDTAGRLAIDEQMMAEIQALHKAIN------PVETLFVVD 222
             +   A+  AK +  DVLI DTAGRL   + +M E++ + + +       P E L V+D
Sbjct: 288 ASVIFDAVQAAKARGIDVLIADTAGRLHTKDNLMEELKKVRRVMGKLDDSAPHEVLLVLD 347

Query: 223 AMTGQDAADTAKAFGDALPLTGVILTKVDGDARGGAALSVRHITGKPIKFIGVGEKTDAL 282
           A TGQ+A +  + F  ++ LTG++LTK+DG A+GG   ++    G PI++IGVGE  D L
Sbjct: 348 AGTGQNAINQTRQFNQSVELTGLVLTKLDGTAKGGVIFALAKQFGTPIRYIGVGEGIDDL 407

Query: 283 EPFHPD 288
             F  D
Sbjct: 408 RTFEAD 413