Pairwise Alignments

Query, 461 a.a., signal recognition particle protein from Vibrio cholerae E7946 ATCC 55056

Subject, 513 a.a., signal recognition particle protein from Sinorhizobium meliloti 1021

 Score =  449 bits (1155), Expect = e-130
 Identities = 244/463 (52%), Positives = 311/463 (67%), Gaps = 11/463 (2%)

Query: 1   MFENLTDRLSKTLKNISGKGRLTEDNIKDTLREVRMALLEADVALPVVRDFVNRVKEGAV 60
           MFE+L DRL   L  ++G+G L+E ++   LREVR ALLEADVAL VVR F  +V+E AV
Sbjct: 1   MFESLQDRLGSILNGLTGRGALSEADVSAALREVRRALLEADVALDVVRSFTEKVREKAV 60

Query: 61  GVEVSKSLTPGQEFIKIVRQQLEAVMGESNEALNLAAQPPAVILMAGLQGAGKTTSVGKL 120
           G E+ KS+ PGQ  +KIV  +L A++G     ++L A  P VI+M GLQG+GKTT+ GK+
Sbjct: 61  GAEIVKSIKPGQMVVKIVHDELIAMLGSEGVTIDLNAAAPVVIMMVGLQGSGKTTTTGKI 120

Query: 121 SKLLKERDKKKVLVVSADVYRPAAIKQLETLANDLGVDFFPSTPDQKPIDIANAAIDHAK 180
           +K L  RDKKKVL+ S D  RPAA +QL  L    GVD  P    Q P DIA  A+  AK
Sbjct: 121 AKRLTARDKKKVLMASLDTRRPAAQEQLRQLGVQTGVDTLPVIAGQSPTDIAARAVQAAK 180

Query: 181 KKFYDVLIVDTAGRLAIDEQMMAEIQALHKAINPVETLFVVDAMTGQDAADTAKAFGDAL 240
              +D++I+DTAGR  IDE +M E+  + +  NP E L V DA+TGQDA + A+ F + +
Sbjct: 181 LGGHDIVILDTAGRTHIDEPLMIEMAEIKRKSNPHEILLVADALTGQDAVNLARNFDERV 240

Query: 241 PLTGVILTKVDGDARGGAALSVRHITGKPIKFIGVGEKTDALEPFHPDRIASRILGMGDV 300
            +TG++LT++DGD RGGAALS+R +TGKPIK IGVGEK D LE FHP R+A RILGMGD+
Sbjct: 241 GITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGVGEKMDELEEFHPRRVADRILGMGDI 300

Query: 301 LSLIEDLQRNVDQEKAEKLAKKFKEKKGFDLEDFREQLGQMKNMGGMMGMLDKLPGMSQL 360
           +SL+E    N+D EKA  +A K  + K FDL D  +QL QM+ MGGM G++  +PGM   
Sbjct: 301 VSLVEKAAENIDAEKAAAMAAKMAKGK-FDLNDLADQLQQMQKMGGMGGIMGLMPGM--- 356

Query: 361 PADMKDK-----VDDRVFKQMEAIINSMTMKERQNPDLIKGSRKKRIAAGSGTQVQDVNR 415
            A MKDK     +DD +FK+  AII+SMT  ER NPD++K SRKKRIA+GSGT   D+N+
Sbjct: 357 -AGMKDKMSAAGLDDSLFKRQLAIISSMTRAERANPDILKHSRKKRIASGSGTDASDINK 415

Query: 416 LLKQFTQMQKMMKKMQQGGMKGMMRNMQ-GLMGGGGRGGFGGG 457
           LLK   QM  MMK M   G  GMM+ M  GL G  G GG  GG
Sbjct: 416 LLKMHRQMADMMKMMGGKGKGGMMKQMMGGLAGKMGLGGLSGG 458