Pairwise Alignments

Query, 461 a.a., signal recognition particle protein from Vibrio cholerae E7946 ATCC 55056

Subject, 504 a.a., Signal recognition particle protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  436 bits (1121), Expect = e-127
 Identities = 239/478 (50%), Positives = 324/478 (67%), Gaps = 23/478 (4%)

Query: 1   MFENLTDRLSKTLKNISGKGRLTEDNIKDTLREVRMALLEADVALPVVRDFVNRVKEGAV 60
           MF+ L+ RL   L  +  +G L+E ++   +REVR+ALLEADVAL VV+ FV +VKE A+
Sbjct: 1   MFDGLSGRLGDVLDKLRRRGSLSEADVDAAMREVRVALLEADVALAVVKQFVAQVKEQAI 60

Query: 61  GVEVSKSLTPGQEFIKIVRQQL----------EAVMGESNEALNLAAQPPAVILMAGLQG 110
           G EV +S+TPGQ  +K+V   L          EA     +  +++A  PP  ILM GLQG
Sbjct: 61  GQEVIRSVTPGQMVVKLVHDALVDMLSGEGGVEAEPDPMSLGIDIAHTPPVPILMVGLQG 120

Query: 111 AGKTTSVGKLSKLLKERDKKKVLVVSADVYRPAAIKQLETLANDLGVDFFPSTPDQKPID 170
           +GKTT+  K++  + +R++KKVL+ S DVYRPAA +QL  L    GVD       QKP++
Sbjct: 121 SGKTTTSAKIALRITKRERKKVLMASLDVYRPAAQRQLAILGEQTGVDTLEVVMGQKPVE 180

Query: 171 IANAAIDHAKKKFYDVLIVDTAGRLAIDEQMMAEIQALHKAINPVETLFVVDAMTGQDAA 230
           IA  A+  A+   YDV+I+DTAGRL IDE +M E+  +   +NP E L V DAMTGQDA 
Sbjct: 181 IARRAMQAARVGGYDVVILDTAGRLHIDEVLMTEVAEVRALVNPHEVLLVTDAMTGQDAV 240

Query: 231 DTAKAFGDALPLTGVILTKVDGDARGGAALSVRHITGKPIKFIGVGEKTDALEPFHPDRI 290
           + A+ F + + +TG++LT+VDGD+RGGAALS+R +TG PIK +G+GEK DALE FH  RI
Sbjct: 241 NVAQEFNEKVGVTGIVLTRVDGDSRGGAALSMRAVTGVPIKLMGMGEKMDALEAFHAQRI 300

Query: 291 ASRILGMGDVLSLIEDLQRNVDQEKAEKLAKKFKEKKGFDLEDFREQLGQMKNMGGMMGM 350
           A RILGMGDV++L+E     ++ ++AE++AK+  E K FDLED   Q+ Q+K MG M G+
Sbjct: 301 AGRILGMGDVVALVEKAAETIEMDQAERVAKRMMEGK-FDLEDMLAQIRQIKKMGDMKGL 359

Query: 351 LDKLPGMSQLPADM-KDKVDDRVFKQMEAIINSMTMKERQNPDLIKGSRKKRIAAGSGTQ 409
           L  +PG+S++   M + K+DD + K+ EAII SMT+KER+NPDL+K SRKKRIA GSG+ 
Sbjct: 360 LGMMPGISKMQRQMAESKIDDNMMKRQEAIILSMTIKERRNPDLVKASRKKRIADGSGSN 419

Query: 410 VQDVNRLLKQFTQMQKMMKKMQQ-GGMKGMMRNMQGLMGGGGR---------GGFGGG 457
           V +VN+LLKQ  QM  +MKKM++ GG KG+M  + G MGGGG          GG GGG
Sbjct: 420 VPEVNKLLKQHQQMAVVMKKMKKMGGKKGLM-GLLGGMGGGGEGDAPDLSALGGAGGG 476