Pairwise Alignments

Query, 461 a.a., signal recognition particle protein from Vibrio cholerae E7946 ATCC 55056

Subject, 507 a.a., signal recognition particle protein Ffh from Phaeobacter inhibens DSM 17395

 Score =  445 bits (1145), Expect = e-129
 Identities = 232/453 (51%), Positives = 319/453 (70%), Gaps = 4/453 (0%)

Query: 1   MFENLTDRLSKTLKNISGKGRLTEDNIKDTLREVRMALLEADVALPVVRDFVNRVKEGAV 60
           MFENL++RLS     ++ +G L+E+++K  LREVR+ALLEADV+LPV RDFV RV+E A 
Sbjct: 1   MFENLSERLSGVFDRLTKQGALSEEDVKTALREVRVALLEADVSLPVARDFVKRVQEQAT 60

Query: 61  GVEVSKSLTPGQEFIKIVRQQLEAVMGESNEALNLAAQ-PPAVILMAGLQGAGKTTSVGK 119
           G  V+KS+TPGQ+ +KIV   L  V+  + +   L    PPA ILM GLQG+GKTT+ GK
Sbjct: 61  GQAVTKSVTPGQQVVKIVHDALVDVLRGAEDPGQLKVDNPPAPILMVGLQGSGKTTTTGK 120

Query: 120 LSKLLKERDKKKVLVVSADVYRPAAIKQLETLANDLGVDFFPSTPDQKPIDIANAAIDHA 179
           L+K LK+++ K+VL+ S DVYRPAA+ QL  L   +GVD  P  P QKP+DIA  A   A
Sbjct: 121 LAKRLKDKEGKRVLMASLDVYRPAAMDQLAVLGTQIGVDTLPIVPGQKPVDIAKRAKQQA 180

Query: 180 KKKFYDVLIVDTAGRLAIDEQMMAEIQALHKAINPVETLFVVDAMTGQDAADTAKAFGDA 239
               YDV ++DTAGRL IDE +M E++ +   ++P ETL VVD +TGQ A + A+ F   
Sbjct: 181 ALGGYDVYMLDTAGRLQIDEVLMQEVEDVRDVVSPRETLLVVDGLTGQVAVEVAEEFDAK 240

Query: 240 LPLTGVILTKVDGDARGGAALSVRHITGKPIKFIGVGEKTDALEPFHPDRIASRILGMGD 299
           + ++GV+LT++DGD RGGAALS+R +TGKPI+F+G+GEK DA+E F PDRIA RILGMGD
Sbjct: 241 IGISGVVLTRMDGDGRGGAALSMRAVTGKPIRFVGLGEKMDAIETFEPDRIAGRILGMGD 300

Query: 300 VLSLIEDLQRNVDQEKAEKLAKKFKEKKGFDLEDFREQLGQMKNMGGMMGMLDKLPGMSQ 359
           +++L+E  Q  ++ E+AE++ K+   K  F++ D + QL QM  MGGM GM+  +PGM++
Sbjct: 301 IVALVEKAQETIEAEQAERMMKRMM-KGHFNMNDLKMQLEQMIQMGGMQGMMQMMPGMAK 359

Query: 360 LPADMKDK-VDDRVFKQMEAIINSMTMKERQNPDLIKGSRKKRIAAGSGTQVQDVNRLLK 418
           +   +++   DD+V +Q  A+I SMT KER NP L++ SRKKRIAAGSG QV D+N+L+K
Sbjct: 360 MAKQVEESGFDDKVLRQQIAMIQSMTKKERANPALLQASRKKRIAAGSGMQVSDLNKLMK 419

Query: 419 QFTQMQKMMKKMQQGGMKGMMRN-MQGLMGGGG 450
              QM  +MKKM + G   M++  M G+ G GG
Sbjct: 420 MHRQMADVMKKMGKMGKGKMLKQAMSGMFGKGG 452