Pairwise Alignments

Query, 461 a.a., signal recognition particle protein from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., signal recognition particle-docking protein FtsY (RefSeq) from Shewanella loihica PV-4

 Score =  135 bits (340), Expect = 3e-36
 Identities = 91/301 (30%), Positives = 154/301 (51%), Gaps = 29/301 (9%)

Query: 2   FENLTDRLSKTLKNISG------KGRLTEDNIKDTLREVRMALLEADVALPVVRDFVNRV 55
           F  L   L +T +NI        KG+  +D + + L E    LL ADV +      +  +
Sbjct: 256 FARLKRGLKRTSENIGSGFIGLFKGKKIDDELFEELEE---QLLIADVGVETTSRLIASL 312

Query: 56  KEGAVGVEVSKSLTPGQEFIKIVRQQLEAVMGESNEALNLAAQP-----PAVILMAGLQG 110
            E A      K L  G+   +++R++++  +    E +++   P     P VILM G+ G
Sbjct: 313 TEQAS----RKQLKDGEALYELMREEMQKTL----EPVSIPLVPENSEGPFVILMVGVNG 364

Query: 111 AGKTTSVGKLSKLLKERDKKKVLVVSADVYRPAAIKQLETLANDLGVDFFPSTPDQKPID 170
            GKTT++GKL+K  +++ K  V++ + D +R AA++QL+       +             
Sbjct: 365 VGKTTTIGKLAKQYQQQGKS-VMLAAGDTFRAAAVEQLQVWGQRNDIPVIAQHTGADSAS 423

Query: 171 IANAAIDHAKKKFYDVLIVDTAGRLAIDEQMMAEIQALHKAIN------PVETLFVVDAM 224
           +   A+  A+ +  D+LI DTAGRL     +M E++ + + +       P E +  +DA 
Sbjct: 424 VLFDALQAARARKIDILIADTAGRLQNKAHLMDELKKVVRVMKKQDESAPHEVMLTLDAS 483

Query: 225 TGQDAADTAKAFGDALPLTGVILTKVDGDARGGAALSVRHITGKPIKFIGVGEKTDALEP 284
           TGQ+A   A+ F +A+ +TG+ ++K+DG A+GG   ++    G PI+ IGVGE+ D L P
Sbjct: 484 TGQNAISQAQLFKEAVGVTGITMSKLDGTAKGGVIFAIADKFGIPIRHIGVGEQIDDLRP 543

Query: 285 F 285
           F
Sbjct: 544 F 544