Pairwise Alignments

Query, 461 a.a., signal recognition particle protein from Vibrio cholerae E7946 ATCC 55056

Subject, 488 a.a., signal recognition particle-docking protein FtsY (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  155 bits (393), Expect = 2e-42
 Identities = 99/307 (32%), Positives = 160/307 (52%), Gaps = 25/307 (8%)

Query: 5   LTDRLSKTLKNISGK--------GRLTEDNIKDTLREVRMALLEADVALPVVRDFVNRVK 56
           LT+ L++T + I  +        GR+ E    + L E+   L+ ADV        + R++
Sbjct: 187 LTEGLARTREQIGRRIDGLLASHGRIDE-GFWEELEEI---LIMADVGFEPTTQLIGRLR 242

Query: 57  EGAVGVEVSKSLTPGQEFIKIVRQQLEAVMGESNEALNLAAQPPAVILMAGLQGAGKTTS 116
           E A              F +++R++LE +          A  PP V+L+ G+ G GKTT+
Sbjct: 243 ERARKAGTDDPA----RFRELLREELEVIFRAPRRIA--AVNPPEVVLLIGVNGVGKTTT 296

Query: 117 VGKLSKLLKERDKKKVLVVSADVYRPAAIKQLETLANDLGVDFFPSTPDQKPIDIANAAI 176
           + KL+    +   +KVL+ + D +R AAI+QLE  A  +G  F+  T    P  +A  A+
Sbjct: 297 IAKLA-YRAQLQGRKVLIAAGDTFRAAAIEQLEIWAKRVGAGFYAKTAGADPAAVAYEAM 355

Query: 177 DHAKKKFYDVLIVDTAGRLAIDEQMMAEIQALHKAIN------PVETLFVVDAMTGQDAA 230
           D A  + YD+L+VDTAGRL     +M E+  + K +       P  ++ V+DA TGQ+A 
Sbjct: 356 DKAVSEGYDLLLVDTAGRLHTKANLMEELHKIRKVLGRKHPGAPHRSILVIDATTGQNAL 415

Query: 231 DTAKAFGDALPLTGVILTKVDGDARGGAALSVRHITGKPIKFIGVGEKTDALEPFHPDRI 290
              K F +A  +  ++LTK+DG A+GG  ++V    G PI ++G+GEK + + PF+    
Sbjct: 416 SQTKLFNEACGVDEIVLTKLDGTAKGGIVVAVAMQFGIPITYVGLGEKMEDMRPFNGSDF 475

Query: 291 ASRILGM 297
           A  +LG+
Sbjct: 476 AMALLGV 482