Pairwise Alignments

Query, 264 a.a., inner membrane protein YpjD from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., Glutamate synthase [NADPH] small chain (EC 1.4.1.13) from Pseudomonas fluorescens FW300-N2E2

 Score =  153 bits (386), Expect = 4e-42
 Identities = 94/262 (35%), Positives = 143/262 (54%), Gaps = 4/262 (1%)

Query: 4   LIAIAAAMLYLLSIATIVPGLVNQTGIRA--KTVFISAAIALLFHGWLLSDLILHSSGQN 61
           L  +AAA LY  + AT+  G    TG +A  + +     +A+L H   L   ++   G  
Sbjct: 9   LATLAAACLY--AAATLYQGTRLATGAKANKRLLVTLGVLAVLGHAASLYTHLMTPIGLG 66

Query: 62  LSILNVASLISFIISLAMSLAMFKTRLWFLLPVAYSFSAINLSAATFLPGTFITHLESDP 121
           L   N ASLI+  +     +A  +  +  LL + +      +  A F P   +  ++ +P
Sbjct: 67  LDFFNAASLIAVAVIGLTLIACSRIPVENLLVLLFPLGLATVLLAQFAPSGTVQIIDEEP 126

Query: 122 KLLLHISLALFSYSTLSIGALYALQLAWLDHKLKSKKVFSINPNLPPLLLVERQLFKIIL 181
            +L HI L++ +Y   +I    AL L   DH+LK+K    +  N PPL  +E  LF  + 
Sbjct: 127 GILAHILLSILAYGLFTIAVFQALLLLVQDHQLKNKHPSGLIRNFPPLQTMESLLFGFLW 186

Query: 182 IGNLLLTGTLLTGFIFVQDMFAQGKAHKGILSFVAWIVYSILLWGHYRKGWRGKKVTWFA 241
            G  LL+ +L++G++FV+++FAQ   HK +L+ +AWIV+S+LLWG  R GWRG K   + 
Sbjct: 187 AGWSLLSLSLISGWLFVENLFAQHLVHKTLLACLAWIVFSVLLWGRNRLGWRGHKAIRWT 246

Query: 242 VAGATLLTLAYFGSRFVREIIL 263
           +AG  LL LAYFGS+ VRE IL
Sbjct: 247 LAGFCLLMLAYFGSKLVREYIL 268