Pairwise Alignments

Query, 264 a.a., inner membrane protein YpjD from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., ABC-type uncharacterized transport system, permease component from Dechlorosoma suillum PS

 Score =  112 bits (280), Expect = 8e-30
 Identities = 63/201 (31%), Positives = 109/201 (54%), Gaps = 9/201 (4%)

Query: 72  SFIISLAMSLAMF-------KTRLWFLLPVAYSFSAINLSAATFLPGTFITHLESDPKLL 124
           SF +SL + LA+F       K R+  L P+    +A         P   +          
Sbjct: 76  SFALSLMLWLAVFIYWMESFKARMEGLQPMVLPLAAACAILPPLFPSAHVLPHADSVGFK 135

Query: 125 LHISLALFSYSTLSIGALYALQLAWLDHKLKSKKVFSINPNLPPLLLVERQLFKIILIGN 184
           LH   A+ +YS  ++ AL+A+ + + + KL  + +     +LPPL+ +E  LF++I++G 
Sbjct: 136 LHFMAAMLAYSLFTLSALHAVFMGFAERKLHQRSLTKSLTSLPPLMTMEALLFRMIIVGF 195

Query: 185 LLLTGTLLTGFIFVQDMFAQGKA--HKGILSFVAWIVYSILLWGHYRKGWRGKKVTWFAV 242
           +LLT  L +G +F + +F +  A  HK + +F++W +++ LL G +  GWRG+    + +
Sbjct: 196 ILLTAALGSGVLFSEALFGKAMALDHKTVFAFISWGIFAALLAGRHAYGWRGRTALRWTM 255

Query: 243 AGATLLTLAYFGSRFVREIIL 263
           AG  +L +AY GSRFV E++L
Sbjct: 256 AGFLVLLMAYVGSRFVVEVLL 276