Pairwise Alignments

Query, 426 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  551 bits (1420), Expect = e-161
 Identities = 281/418 (67%), Positives = 346/418 (82%), Gaps = 2/418 (0%)

Query: 1   MDDISTGILFALLACLIIISAYFSGSETGMMALNRYRLKHLANSGHKGAKRVEKLLDRPD 60
           MD ISTG L   L  LI+ISAYFSGSET MM+LNRYRL+HLA++GHKGAKR  KLLDRPD
Sbjct: 1   MDAISTGTLLLSLLVLILISAYFSGSETAMMSLNRYRLRHLASNGHKGAKRASKLLDRPD 60

Query: 61  RLIGLILIGNNLVNILASAIATIIGMRLYGDLGVAIATGALTLVILVFAEVTPKTLAALY 120
           RLIGLILIGNNLVNILASAIATIIGMR++GD+GVAIATG LT+V+LVFAEVTPKT+AAL+
Sbjct: 61  RLIGLILIGNNLVNILASAIATIIGMRIWGDVGVAIATGLLTVVVLVFAEVTPKTVAALH 120

Query: 121 PERVSYASSVLLTILMKLLSPLVLFVNLMTNGLIRILGISPKHGKGDHLSSEELRTVVNE 180
           PER++Y SS+LL  L+ +L PLV  +N++T+G++R++GI       D LS EELRTVV+E
Sbjct: 121 PERIAYPSSLLLKWLLVILQPLVKVMNIITSGILRLIGIR-NVATNDALSQEELRTVVHE 179

Query: 181 AGGLIPRRHQDMLLSILDLEHVTVNDIMIPRNEITGININDDWKSIVRQLVHSPHGRVVL 240
           AG LIP+RHQDMLLSILDLE VTV DIMIPR EI  IN+NDD+K I RQ+V SPH RV++
Sbjct: 180 AGALIPQRHQDMLLSILDLEKVTVEDIMIPRAEIYAINVNDDFKQINRQVVTSPHTRVLV 239

Query: 241 YRDKIDEVVGILRLREASRFMLEKNDFNKEMLLRAADEIYFIPEGTPLNVQLLKFQRNKE 300
           YRD ID+ VG + LR+A R +  K +F+K  LLRA  E+YFIPEGTPLNVQL  FQ NKE
Sbjct: 240 YRDTIDDAVGFIHLRDALR-LQSKEEFSKATLLRAVKELYFIPEGTPLNVQLANFQHNKE 298

Query: 301 RIGLIVDEYGEIIGLTTLEDILEEIVGEFTTSMSPSLADEITPQGDGSFLIEGSANIRDI 360
           RIGL+VDEYG+I GL TLEDILEEIVG+FTTSM P+ ++EI PQ DGS LI+ S NIR++
Sbjct: 299 RIGLVVDEYGDIQGLVTLEDILEEIVGDFTTSMVPTASEEIHPQEDGSLLIDASINIREL 358

Query: 361 NKSLKWKLPTDGPRTLNGLILEHLEEIPASHLSVKVAQHKMEILELEENRIKLVKVYP 418
           NK +KW+LPTDGP+TLNGLILE+LE+IP+ + S+++  + +E++E+ EN +K V+V P
Sbjct: 359 NKEMKWELPTDGPKTLNGLILEYLEDIPSPNTSLRLEGYPIEVMEVAENMVKTVRVMP 416